PROTEIN: Rep_1346_c_10_4
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Protein File & Metadata
Source:
Rep_1346_c_10_4.pdb
Genome ID:
Protein ID:
Rep_1346_c_10_4
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Protein Sequence
MKKILFMLVV LIFGSGIIVA GEVPEDIVFV GDSIMDSSKQ YIAPNFKNPY FDTKISRQFS 60 TLPGIVTKLV ENGKLKTTLV VHLGTNGKFT DKDFDYVMKM ANGKDVFFMN TAHKDPWEQE 120 VNKKLKEKVA QYPNAYLIDW YSYAKGKNQY FYKDRTHPND KGQRYYADFL TNEIKKHYLE 180 ENKEEENKDT KNNDSLKNNP SNPQNNDGNS EKIIDLRNLK KDTIKNY 227
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A2R8QJS0-F1-model_v4 | 22 | 178 | 130 | 300 | 0.519 |
0.844 |
| AF-Q2FV54-F1-model_v4 | 8 | 182 | 436 | 603 | 0.4615 |
0.8996 |
| AF-A0A133CQE1-F1-model_v4 | 2 | 180 | 439 | 615 | 0.4568 |
0.8563 |
| AF-Q2FZS9-F1-model_v4 | 1 | 178 | 439 | 604 | 0.4544 |
0.897 |
| AF-Q8CY83-F1-model_v4 | 24 | 182 | 429 | 600 | 0.4322 |
0.8851 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7G9P5G2-F1-model_v4 | CE12 | 22 | 183 | 16 | 217 | 0.5873 |
0.8242 |
| AF-A0A517TDC9-F1-model_v4 | CE12 | 24 | 182 | 26 | 224 | 0.5818 |
0.8416 |
| AF-F0SQE1-F1-model_v4 | CE12 | 24 | 182 | 25 | 235 | 0.5811 |
0.8519 |
| AF-A0A6G8CFM7-F1-model_v4 | CE12 | 24 | 183 | 24 | 247 | 0.5537 |
0.8258 |
| AF-A0A0A8IBJ8-F1-model_v4 | CBM1 , CE3 | 22 | 227 | 18 | 283 | 0.5471 |
0.6802 |
| AF-B2ATA5-F1-model_v4 | CBM1 , CE3 | 22 | 201 | 18 | 242 | 0.5471 |
0.7812 |
| AF-A0A447BVV8-F1-model_v4 | CBM1 , CE3 | 22 | 201 | 18 | 243 | 0.5453 |
0.7779 |
| A0A3S0WQH3 | CBM50 | 1 | 190 | 48 | 337 | 0.5197 |
0.7807 |
| AF-D5HID5-F1-model_v4 | CE17 | 20 | 216 | 16 | 230 | 0.5069 |
0.7348 |
| A0A9E9MNQ8 | GH184 | 24 | 227 | 37 | 250 | 0.4548 |
0.7067 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A447BVV8 | CBM1 , CE3 | 22 | 201 | 18 | 243 | 0.5453 |
0.7779 |
| A0A3S0WQH3 | CBM50 | 1 | 190 | 48 | 337 | 0.5197 |
0.7807 |
| B8GDR2 | CE3 | 17 | 180 | 26 | 238 | 0.5084 |
0.8203 |
| D5HID5 | CE17 | 20 | 216 | 16 | 230 | 0.5069 |
0.7348 |
| A0A9E9MNQ8 | GH184 | 24 | 227 | 37 | 250 | 0.4548 |
0.7067 |
| QQO07014.1 | GH23 | 1 | 177 | 452 | 643 | 0.4235 |
0.852 |
| A0A5C1AFA3 | CE12 | 24 | 187 | 21 | 400 | 0.4174 |
0.8314 |
| AWR15422.1 | GH23 | 20 | 181 | 197 | 352 | 0.413 |
0.8956 |
| A0A5B9WJH4 | CE12 , GH105 | 24 | 180 | 20 | 246 | 0.407 |
0.8353 |
| A0A9X3RUH3 | GH184 | 1 | 181 | 37 | 354 | 0.4027 |
0.7617 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6vjp-assembly2.cif.gz_B | 25 | 177 | 1 | 153 | 0.7522 |
0.9158 |
| 6wn9-assembly2.cif.gz_B | 27 | 184 | 1 | 155 | 0.7506 |
0.9094 |
| 5ug1-assembly1.cif.gz_A | 24 | 182 | 3 | 174 | 0.6924 |
0.885 |
| 7e16-assembly2.cif.gz_B | 22 | 182 | 1 | 207 | 0.5979 |
0.81 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q99R71-F1-model_v4 | 15 | 185 | 434 | 603 | 0.4688 |
0.9047 |
| AF-Q5HCY3-F1-model_v4 | 15 | 185 | 434 | 603 | 0.4671 |
0.9007 |
| AF-Q6G6A7-F1-model_v4 | 9 | 185 | 434 | 603 | 0.4639 |
0.8943 |
| AF-Q6GDN2-F1-model_v4 | 16 | 185 | 435 | 603 | 0.4637 |
0.898 |
| AF-Q79ZY2-F1-model_v4 | 10 | 185 | 435 | 603 | 0.4629 |
0.8975 |
| AF-Q7A3D6-F1-model_v4 | 6 | 182 | 436 | 603 | 0.4622 |
0.8998 |
| AF-Q2FV54-F1-model_v4 | 8 | 182 | 436 | 603 | 0.4615 |
0.8996 |
| AF-Q7A1B1-F1-model_v4 | 2 | 178 | 439 | 604 | 0.4515 |
0.8912 |
| AF-Q99VB6-F1-model_v4 | 1 | 178 | 440 | 604 | 0.4463 |
0.8852 |
| AF-Q5HHB1-F1-model_v4 | 1 | 178 | 430 | 604 | 0.4458 |
0.8359 |