PROTEIN: Rep_1319_c_60_4
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Protein File & Metadata
Source:
Rep_1319_c_60_4.pdb
Genome ID:
Protein ID:
Rep_1319_c_60_4
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Protein Sequence
MKKFKKSDIN SKIFNKGNKV LFFQADGICP CVPARSDLED IEKSFQDEIE FYEYSAKNVR 60 QINEDEIIKH FEALPFPTTL FIKDGNIIYR LVGDNSKSTY RNYATKLLEE K 111
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-X8FGP0-F1-model_v4 | 1 | 111 | 3 | 107 | 0.8556 |
0.9271 |
| AF-O53161-F1-model_v4 | 1 | 111 | 3 | 107 | 0.8131 |
0.9319 |
| AF-K0ETT9-F1-model_v4 | 1 | 111 | 3 | 107 | 0.8109 |
0.9299 |
| AF-Q54NX2-F1-model_v4 | 1 | 111 | 15 | 124 | 0.7693 |
0.8587 |
| AF-Q9W022-F1-model_v4 | 1 | 111 | 34 | 142 | 0.7615 |
0.895 |
| AF-I1KM08-F1-model_v4 | 1 | 110 | 69 | 174 | 0.7223 |
0.9397 |
| AF-Q9SEU7-F1-model_v4 | 1 | 110 | 68 | 173 | 0.7185 |
0.9333 |
| AF-Q6P131-F1-model_v4 | 1 | 110 | 60 | 166 | 0.7102 |
0.903 |
| AF-Q6NPF9-F1-model_v4 | 1 | 111 | 65 | 171 | 0.656 |
0.849 |
| AF-Q9CC76-F1-model_v4 | 1 | 111 | 42 | 150 | 0.5821 |
0.885 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2o7k-assembly1.cif.gz_A | 1 | 108 | 2 | 103 | 0.8641 |
0.935 |
| 2o89-assembly1.cif.gz_A | 1 | 108 | 2 | 103 | 0.8611 |
0.9325 |
| 7q3k-assembly3.cif.gz_C | 1 | 108 | 1 | 104 | 0.8568 |
0.917 |
| 7c3f-assembly4.cif.gz_L | 1 | 108 | 4 | 107 | 0.8547 |
0.9248 |
| 1w89-assembly2.cif.gz_C | 1 | 109 | 2 | 107 | 0.85 |
0.9067 |
| 3tco-assembly3.cif.gz_C | 1 | 108 | 4 | 106 | 0.8494 |
0.9255 |
| 2ynx-assembly2.cif.gz_B | 1 | 108 | 2 | 105 | 0.8486 |
0.9142 |
| 2voc-assembly1.cif.gz_B | 1 | 109 | 2 | 104 | 0.8477 |
0.9175 |
| 3ziv-assembly3.cif.gz_C | 1 | 108 | 2 | 105 | 0.8447 |
0.9109 |
| 2e0q-assembly1.cif.gz_A | 1 | 110 | 1 | 104 | 0.8437 |
0.9047 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P50254-F1-model_v4 | 1 | 109 | 3 | 107 | 0.8626 |
0.9244 |
| AF-P51225-F1-model_v4 | 1 | 109 | 3 | 107 | 0.8624 |
0.9244 |
| AF-Q54NX2-F1-model_v4 | 1 | 111 | 15 | 124 | 0.7693 |
0.8587 |
| AF-Q9SEU7-F1-model_v4 | 1 | 110 | 68 | 173 | 0.7185 |
0.9333 |
| AF-Q95108-F1-model_v4 | 1 | 109 | 61 | 166 | 0.7109 |
0.9113 |
| AF-Q6NPF9-F1-model_v4 | 1 | 111 | 65 | 171 | 0.656 |
0.849 |
| AF-P9WG60-F1-model_v4 | 1 | 111 | 45 | 153 | 0.5836 |
0.889 |