PROTEIN: Rep_1308_c_89_6
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Protein File & Metadata
Source:
Rep_1308_c_89_6.pdb
Genome ID:
Protein ID:
Rep_1308_c_89_6
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Protein Sequence
MNENENNQAE MSTNVKNQPK IMISYYQLNP QIAQAGKNFD LSFGLYNTNS KNAIYNLKAT 60 IEQNLGAQPQ NSGENNAMVS DGSVFSPVNQ SNSFYVAALY PWNTANKHIT MNVLPNAVAG 120 NYVINLSIEY EDADGNQYKT TEAIGIPVVQ RAGVTMSELK SDELMVGNPT EMSVNIYNTG 180 KDNLNTFMCD VIGKGIKIEN DKKFIGNFNT GTQETFSFTA TPTRTGEIEG QIMVSYEDST 240 GKVHTQTKDF KKEVMEGMPE DMTGDMNGEM TGEMGAEDPS MNQGSVLTSP FVWVGLIVIL 300 ILAAILYKKK KAKKEDEELL IDDED 325
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 11 | 269 | 72 | 411 | 0.545 |
0.7814 |
| AF-Q58956-F1-model_v4 | 12 | 281 | 37 | 468 | 0.4556 |
0.6799 |
| AF-Q58205-F1-model_v4 | 3 | 258 | 10 | 267 | 0.452 |
0.6853 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2S9HPB9 | CBM13 | 1 | 264 | 107 | 686 | 0.3829 |
0.6586 |
| A0A0K2SH33 | CBM50 | 13 | 296 | 34 | 1086 | 0.3429 |
0.5936 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6msu-assembly1.cif.gz_A | 1 | 278 | 529 | 924 | 0.3335 |
0.5653 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q58901-F1-model_v4 | 11 | 269 | 72 | 411 | 0.545 |
0.7814 |
| AF-P29577-F1-model_v4 | 15 | 218 | 21 | 227 | 0.5407 |
0.7162 |
| AF-Q58956-F1-model_v4 | 12 | 281 | 37 | 468 | 0.4556 |
0.6799 |
| AF-Q58205-F1-model_v4 | 3 | 258 | 10 | 267 | 0.452 |
0.6853 |
| AF-P29579-F1-model_v4 | 17 | 289 | 20 | 367 | 0.4391 |
0.6287 |
| AF-Q9AIS7-F1-model_v4 | 10 | 255 | 234 | 557 | 0.405 |
0.6566 |
| AF-Q253E5-F1-model_v4 | 10 | 255 | 235 | 558 | 0.4018 |
0.6513 |
| AF-P23700-F1-model_v4 | 10 | 255 | 233 | 556 | 0.4007 |
0.6484 |
| AF-P94664-F1-model_v4 | 10 | 255 | 235 | 558 | 0.3967 |
0.6424 |
| AF-P0CZ18-F1-model_v4 | 10 | 255 | 234 | 557 | 0.3948 |
0.6384 |