PROTEIN: Rep_1261_c_50_4
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Protein File & Metadata
Source:
Rep_1261_c_50_4.pdb
Genome ID:
Protein ID:
Rep_1261_c_50_4
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Protein Sequence
MIRNNQINYT INRQNSFEII FSFYIIVSIL SNSFFALYLP NYSALVLISF FFLFVREIVI 60 NRFRIKTLFQ TGLVLCFIVL IWTSNNLQLT NPLISLVIFS LCARDLDYDK ILEISFKLIL 120 IMLLIIIFSS QLGIITDYVL NQAGRVRHFL GFLYALYPGT LIFELMLIAI YLHKSFKIKL 180 FLVMLDFVVF SFTDSRLSFG LTLISLLLCS GPIVKIVKKV TENNIIRILF SSIYMWFAFL 240 SIYISLIYTE SIKWLYELNR VLSFRLRLSQ EAIATYGITL TGKQVSFTGE AVNAYGINVN 300 AGTEYFTVDN GYLDILIKYG VIAEVIYIIL VSYLLYKLLK TGNYRLYLII CIIGLHLLID 360 FSMLNLIYNV FILVLFYRND SLIKIKGNLS EKVRHKFKIV LSK 403
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7D6J0J0-F1-model_v4 | GT4 | 1 | 384 | 8 | 422 | 0.6826 |
0.7545 |
| AF-A2S058-F1-model_v4 | GH39 | 5 | 384 | 1 | 399 | 0.6774 |
0.7551 |
| B7AUF6 | GT4 | 1 | 399 | 6 | 391 | 0.6154 |
0.8618 |
| AF-A0A7L9SQD7-F1-model_v4 | GT4 | 7 | 381 | 20 | 391 | 0.6045 |
0.8538 |
| AF-A0A7Z3BHU7-F1-model_v4 | GH39 | 11 | 384 | 18 | 418 | 0.5165 |
0.7593 |
| AF-A0A6G6J4Y8-F1-model_v4 | GH39 | 11 | 384 | 18 | 418 | 0.5159 |
0.7585 |
| AF-M4X4V7-F1-model_v4 | GH39 | 11 | 385 | 18 | 419 | 0.5143 |
0.7549 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7D6J0J0 | GT4 | 1 | 384 | 8 | 422 | 0.6826 |
0.7545 |
| A2S058 | GH39 | 5 | 384 | 1 | 399 | 0.6774 |
0.7551 |
| B7AUF6 | GT4 | 1 | 399 | 6 | 391 | 0.6154 |
0.8618 |
| A0A7L9SQD7 | GT4 | 7 | 381 | 20 | 391 | 0.6045 |
0.8538 |
| M4X4V7 | GH39 | 11 | 385 | 18 | 419 | 0.5143 |
0.7549 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.