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PROTEIN: Rep_1261_c_50_3

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Protein File & Metadata
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Source:
Rep_1261_c_50_3.pdb
Genome ID:
Rep_1261
Protein ID:
Rep_1261_c_50_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
METIHRFLLN   ARTRYYNFNN   LNSKYKFDNR   LQGKEKYLIV   LAGYKQYLYS   YVFSRLEKYL 60
PNDIDVCIVS   SGLYDEKLSS   IAKNNQWSYL   SVEKNKVAIA   QNIAISLNEN   AKYIYKMDED 120
IFVTQNSFEK   LYDTYIDVKN   NGKTDIGFVA   PIIPLNGFGF   MKILEYYNLE   KQYSEKFGRP 180
IYSSRNEMPI   ISNPETAKFF   WGEGGYVPNL   DQMNADFSLL   PYNYSVCSIR   FSIGFIMFDR 240
ALWDAMDMFR   QTLGSGIGND   ETQICGFCIN   SSKPIIVSGN   CVVGHFSFGP   QTKSMVDYLD 300
SSSMDYYKQL   RD 312
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-C0NWW0-F1-model_v4 3 312 11 423 0.6525 0.768
AF-C0NZA9-F1-model_v4 33 312 72 408 0.6343 0.8179
AF-A0A1C1CRS5-F1-model_v4 33 312 118 460 0.6091 0.814
AF-C1HAE4-F1-model_v4 33 312 85 457 0.6076 0.8139
AF-P36667-F1-model_v4 35 292 1 226 0.5849 0.7455
AF-X8FFM6-F1-model_v4 34 295 18 221 0.5848 0.7949
AF-K0EYK6-F1-model_v4 31 293 6 240 0.5825 0.7603
AF-P9WMX7-F1-model_v4 31 301 1 244 0.5806 0.6831
AF-O24928-F1-model_v4 34 310 2 259 0.577 0.6496
AF-P9WMY3-F1-model_v4 32 293 1 243 0.5717 0.7325
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1X7HMG7-F1-model_v4 GT2 34 294 2 214 0.6763 0.8741
AF-A0A1S8L3Y4-F1-model_v4 GT2 34 293 1 217 0.6737 0.8514
AF-A0A6F8ZF50-F1-model_v4 GT2 35 293 1 216 0.6731 0.8676
AF-A0A089HSZ4-F1-model_v4 GT2 34 293 2 216 0.6686 0.8622
AF-Q97GL9-F1-model_v4 GT2 34 293 1 217 0.667 0.85
A0A8A7KD22 GT2 34 293 3 219 0.6659 0.8533
AF-A0A8A7KD22-F1-model_v4 GT2 34 293 3 219 0.6659 0.8533
AF-A0A3S9V3I8-F1-model_v4 GT2 34 293 5 219 0.6648 0.8627
AF-A0A7D3XRR3-F1-model_v4 GT2 34 293 3 219 0.6643 0.8547
AF-A0A1B2DXN5-F1-model_v4 GT2 33 293 2 217 0.6593 0.8604
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A6F8ZF50 GT2 35 293 1 216 0.6731 0.8676
A0A8A7KD22 GT2 34 293 3 219 0.6659 0.8533
A0A853PZU2 GT2 34 294 2 218 0.6519 0.8676
A0A518VFX1 GT2 32 293 1 218 0.6469 0.8676
A0A1M6D5F7 GT2 34 293 5 220 0.6459 0.873
A0A6J5S1I5 GT2 23 295 5 223 0.6436 0.7978
A0A9X0XVS0 GT2 34 294 13 230 0.6418 0.8656
A0A9C7CAY9 GT2 31 294 3 245 0.6401 0.7809
WDV45730.1 GT2 30 293 5 223 0.6322 0.8552
A0A410X322 GT2 34 293 3 219 0.631 0.8624
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6p61-assembly2.cif.gz_B 32 287 1 191 0.6612 0.836
4de7-assembly1.cif.gz_A-2 34 293 23 229 0.5226 0.7428
2apc-assembly1.cif.gz_A 34 299 1 227 0.5166 0.7373
1fo8-assembly1.cif.gz_A 34 295 2 216 0.5126 0.7583
3ckq-assembly1.cif.gz_A-2 34 293 34 243 0.5074 0.7327
7sp6-assembly1.cif.gz_A 34 312 45 492 0.4713 0.6475
6egs-assembly1.cif.gz_A 29 294 4 281 0.471 0.6661
4d0z-assembly3.cif.gz_C 34 293 57 287 0.4709 0.7588
7sp7-assembly1.cif.gz_A 34 312 45 496 0.4702 0.6479
7sp8-assembly1.cif.gz_A 34 312 45 499 0.4692 0.648
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0CD75-F1-model_v4 28 310 1 252 0.5876 0.6725
AF-Q4KXC9-F1-model_v4 34 292 7 214 0.5869 0.7934
AF-P36667-F1-model_v4 35 292 1 226 0.5849 0.7455
AF-B0BBG2-F1-model_v4 28 309 1 251 0.583 0.6699
AF-P9WMX7-F1-model_v4 31 301 1 244 0.5806 0.6831
AF-O32268-F1-model_v4 34 294 6 212 0.5792 0.7839
AF-P71054-F1-model_v4 34 293 5 214 0.5759 0.8061
AF-P9WMY3-F1-model_v4 32 293 1 243 0.5717 0.7325
AF-Q46635-F1-model_v4 35 293 1 209 0.5711 0.7848
AF-Q03084-F1-model_v4 34 293 6 218 0.564 0.775
Download Full SwissProt Results