PROTEIN: Rep_1261_c_20_17
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Protein File & Metadata
Source:
Rep_1261_c_20_17.pdb
Genome ID:
Protein ID:
Rep_1261_c_20_17
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Protein Sequence
MTKIKESSFN SYEEMRLFSK FRQNVLCWYE FKNESRILHL GSECGILTNY LVRFGKVICI 60 ETNEQYNSIN KIMNPNVICF SNYYDFFKQN KSKFDYIIVE NFLESEKNKK QIIEELLTLL 120 DKNGEVIILT NNKLGLKYFN GYCDEITKKM FGNLTINNKL YTYKQWINIL EELNREYFIF 180 YPFPNKDFPI SIYSDRAIDS HFPIFYEPSE KNKIDFFDER EAFEEIKKSG YFKDFCNSFF 240 IVINPKNCHY LYSKISSERK EEFQICTNIL SINGEKLVYK KALHQQGINH LKRVNEYYFN 300 FTDKVKKEMF YYCPSNFVNG KLLFEYIEGK NLEQIISEDV KNNNIDEIIN HISIILNILT 360 IEKDEDFHSS ELLKKVFGDL DYSIFIGEKC QPVNNIDLIL ENVIFNGDYF VIDYEWILKC 420 CIPKKFIVFR AIFHSQCLSK LKEEEIKKIY NYFEISEEMI EIFLKMENNF QNYVTSQTIF 480 SQAMASNSYS IPFKNNQNRI INIKLSQNNN ERKEYNFVDT SEIELKYNLN PSLENISIKI 540 EKKSIIKINK IELDGIPYKN LYSNADLIIN NDYYFLNPPV FNLKNNKFST LKINLTFYYY 600 GVDAIDNITA LIETNKSLDD QIKELKKNKV VKFFEKIKR 639
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 639 | 29 | 1165 | 0.5508 |
0.8224 |
| C6LFR9 | GT2 , GT4 | 1 | 639 | 29 | 1763 | 0.5338 |
0.7985 |
| A0A829WPC6 | GT2 , GT4 | 1 | 550 | 13 | 538 | 0.5221 |
0.8453 |
| A0A2T4T973 | GT2 , GT4 | 1 | 590 | 14 | 659 | 0.5129 |
0.7351 |
| AF-A0A1W6YSP4-F1-model_v4 | GT4 | 1 | 639 | 41 | 1116 | 0.5073 |
0.6494 |
| AF-W5VX79-F1-model_v4 | GT2 | 1 | 639 | 33 | 1083 | 0.5056 |
0.6654 |
| A0A656QNS9 | GT4 | 1 | 624 | 37 | 885 | 0.4964 |
0.655 |
| AF-A0A385Q4F2-F1-model_v4 | GT2 , GT4 | 1 | 639 | 9 | 677 | 0.4962 |
0.6563 |
| AF-A0A4D6U7Q2-F1-model_v4 | GT4 | 1 | 639 | 47 | 1095 | 0.496 |
0.6334 |
| AF-A0A1H0A2W5-F1-model_v4 | GT2 | 1 | 601 | 20 | 1086 | 0.4945 |
0.6861 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A4P9E9V2 | GT2 , GT4 | 1 | 639 | 29 | 1165 | 0.5508 |
0.8224 |
| C6LFR9 | GT2 , GT4 | 1 | 639 | 29 | 1763 | 0.5338 |
0.7985 |
| A0A829WPC6 | GT2 , GT4 | 1 | 550 | 13 | 538 | 0.5221 |
0.8453 |
| A0A2T4T973 | GT2 , GT4 | 1 | 590 | 14 | 659 | 0.5129 |
0.7351 |
| AUS78749.1 | GT2 | 1 | 639 | 20 | 982 | 0.5111 |
0.6761 |
| A0A1W6YSP4 | GT4 | 1 | 639 | 41 | 1116 | 0.5073 |
0.6494 |
| W5VX79 | GT2 | 1 | 639 | 33 | 1083 | 0.5056 |
0.6654 |
| A0A656QNS9 | GT4 | 1 | 624 | 37 | 885 | 0.4964 |
0.655 |
| A0A4D6U7Q2 | GT4 | 1 | 639 | 47 | 1095 | 0.496 |
0.6334 |
| A0A4D7YL43 | GT2 | 1 | 624 | 66 | 1234 | 0.4933 |
0.6763 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.