PROTEIN: Rep_1238_c_76_11
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Protein File & Metadata
Source:
Rep_1238_c_76_11.pdb
Genome ID:
Protein ID:
Rep_1238_c_76_11
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Protein Sequence
MKSILFTVAS FKNFAGSELV TLSQVNYFLE KGWKVDVFTL EYDFPLKEKV DSKVTVVTLD 60 NLEDIQKDYD LIIARQYPLL DYALFTLRVK GKRVYYESVS YRIPIDAYPI YYKHLTLIGA 120 VSINIINQMN KYGYDTTDVY YMPNYASKDF FDVNHKYKNE PKKIAIVSNH VPKELEEFKT 180 YTESVSNIKV DIYGEHHTYT LITPEVLNEY DVVISIAKTV FYAIAMGIPC YTYDEDFTEG 240 YITLDNYKEN LMHNFAHGLG DNKKSAREIY EDITNNYSSI IKQSTKLKKY AKNDFYFDTV 300 MDKLYDEIMK REEVNYDVLY KKYSILEYTS RTYIEDRDFL KKQELMWYHK SLELGDLYQK 360 EIGKTVDALG KYDVLLESYN SILNSKGWKL LEKVKKIKKR 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05083-F1-model_v4 | 1 | 309 | 1 | 353 | 0.6544 |
0.8036 |
| AF-P9WMZ5-F1-model_v4 | 1 | 321 | 1 | 378 | 0.6476 |
0.7918 |
| AF-Q5F734-F1-model_v4 | 1 | 308 | 4 | 354 | 0.6435 |
0.7938 |
| AF-O25175-F1-model_v4 | 2 | 324 | 1 | 389 | 0.6426 |
0.7925 |
| AF-O07147-F1-model_v4 | 1 | 321 | 1 | 374 | 0.6421 |
0.782 |
| AF-Q5FAD9-F1-model_v4 | 2 | 312 | 1 | 354 | 0.6391 |
0.7818 |
| AF-K0F3N9-F1-model_v4 | 1 | 321 | 1 | 374 | 0.6332 |
0.7717 |
| AF-P27127-F1-model_v4 | 2 | 316 | 1 | 359 | 0.6305 |
0.7681 |
| AF-Q06994-F1-model_v4 | 2 | 314 | 1 | 359 | 0.6194 |
0.7593 |
| AF-P26388-F1-model_v4 | 1 | 311 | 1 | 406 | 0.616 |
0.801 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WDS96101.1 | GT4 | 1 | 333 | 4 | 301 | 0.7456 |
0.9033 |
| A0A503KFN0 | GT4 | 2 | 344 | 1 | 339 | 0.7444 |
0.8621 |
| AF-A0A6G6KE04-F1-model_v4 | GT0 | 1 | 367 | 1 | 363 | 0.732 |
0.8357 |
| A0A9X7Z5Z2 | GT4 | 2 | 309 | 1 | 353 | 0.7249 |
0.89 |
| WAH36127.1 | GT4 | 2 | 315 | 1 | 362 | 0.7229 |
0.8826 |
| WDL96436.1 | GT4 | 2 | 312 | 1 | 352 | 0.7155 |
0.8701 |
| A0A920DDR7 | GT4 | 1 | 313 | 3 | 356 | 0.713 |
0.8658 |
| AF-A0A6B8RPU0-F1-model_v4 | GT4 | 1 | 318 | 4 | 365 | 0.7097 |
0.8599 |
| AF-A0A3G3JX66-F1-model_v4 | GT4 | 2 | 313 | 1 | 361 | 0.7084 |
0.8696 |
| AF-A0A6H1PAP5-F1-model_v4 | GT4 | 1 | 314 | 3 | 371 | 0.7054 |
0.8714 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| WDS96101.1 | GT4 | 1 | 333 | 4 | 301 | 0.7456 |
0.9033 |
| A0A503KFN0 | GT4 | 2 | 344 | 1 | 339 | 0.7444 |
0.8621 |
| A0A9X7Z5Z2 | GT4 | 2 | 309 | 1 | 353 | 0.7249 |
0.89 |
| WAH36127.1 | GT4 | 2 | 315 | 1 | 362 | 0.7229 |
0.8826 |
| WAH39791.1 | GT4 | 2 | 315 | 1 | 351 | 0.7187 |
0.8768 |
| WDL96436.1 | GT4 | 2 | 312 | 1 | 352 | 0.7155 |
0.8701 |
| A0A920DDR7 | GT4 | 1 | 313 | 3 | 356 | 0.713 |
0.8658 |
| A0A6B8RPU0 | GT4 | 1 | 318 | 4 | 365 | 0.7097 |
0.8599 |
| A0A6H1PAP5 | GT4 | 1 | 314 | 3 | 371 | 0.7054 |
0.8714 |
| WAH39790.1 | GT4 | 2 | 318 | 1 | 369 | 0.7026 |
0.8602 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2gek-assembly1.cif.gz_A | 2 | 320 | 1 | 361 | 0.6537 |
0.7867 |
| 6n1x-assembly1.cif.gz_A | 1 | 314 | 4 | 377 | 0.6415 |
0.7989 |
| 3mbo-assembly3.cif.gz_E | 1 | 315 | 1 | 375 | 0.6349 |
0.787 |
| 7qsg-assembly1.cif.gz_A | 1 | 315 | 3 | 379 | 0.6348 |
0.7911 |
| 5zer-assembly1.cif.gz_B | 1 | 314 | 2 | 346 | 0.6308 |
0.7567 |
| 5d00-assembly1.cif.gz_A | 1 | 313 | 2 | 361 | 0.6178 |
0.7571 |
| 5d01-assembly1.cif.gz_A | 1 | 313 | 2 | 357 | 0.6137 |
0.7483 |
| 5n7z-assembly1.cif.gz_A | 2 | 312 | 1 | 357 | 0.6024 |
0.7414 |
| 4nc9-assembly5.cif.gz_B | 1 | 320 | 3 | 361 | 0.5867 |
0.7047 |
| 7vlb-assembly2.cif.gz_B | 2 | 313 | 1 | 353 | 0.5728 |
0.6994 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O05083-F1-model_v4 | 1 | 309 | 1 | 353 | 0.6544 |
0.8036 |
| AF-Q46634-F1-model_v4 | 1 | 309 | 1 | 351 | 0.648 |
0.7939 |
| AF-P9WMZ5-F1-model_v4 | 1 | 321 | 1 | 378 | 0.6476 |
0.7918 |
| AF-P9WMZ4-F1-model_v4 | 1 | 321 | 1 | 378 | 0.6475 |
0.7918 |
| AF-Q7TY88-F1-model_v4 | 1 | 321 | 1 | 378 | 0.647 |
0.7914 |
| AF-O07147-F1-model_v4 | 1 | 321 | 1 | 374 | 0.6421 |
0.782 |
| AF-Q4JAK2-F1-model_v4 | 1 | 312 | 1 | 352 | 0.6339 |
0.7707 |
| AF-A0QWG6-F1-model_v4 | 1 | 321 | 1 | 375 | 0.6313 |
0.7793 |
| AF-P27127-F1-model_v4 | 2 | 316 | 1 | 359 | 0.6305 |
0.7681 |
| AF-Q3J4M2-F1-model_v4 | 1 | 314 | 3 | 364 | 0.6202 |
0.7622 |