PROTEIN: Rep_1142_c_0_29
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Protein File & Metadata
Source:
Rep_1142_c_0_29.pdb
Genome ID:
Protein ID:
Rep_1142_c_0_29
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Protein Sequence
MLPYPFSYFS SIWGFRKPLS KRFGLNWFQL LFTSIFLISL SMVPIAIQNS SQETYPLETF 60 IDNVYEPLTD KVVQDLSEHA TIVDGKLTYT GTASQEPSIV IGPSQSKELP KDLQLHFDTN 120 ELVISKESKE LTRISYRAIE TESFKSKDSL TQAISKDWYQ QNRVYISLFL VLGASFLFGL 180 NFFIVSLGAS LLLYITKKSR LFSFRTFKEC YHFILNCLGL PTLITLILGL FGQNMATLIT 240 VQNILFVLYL VTIFYKTHFR DPDYHK 266
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59204-F1-model_v4 | 1 | 266 | 1 | 266 | 0.9887 |
0.9947 |
| AF-A0A132ZFQ3-F1-model_v4 | 1 | 265 | 1 | 271 | 0.8664 |
0.8985 |
| AF-A0A132Z3C4-F1-model_v4 | 1 | 266 | 1 | 265 | 0.5436 |
0.5746 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 266 | 8 | 273 | 0.8345 |
0.8718 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387DIN9 | GH65 | 1 | 266 | 8 | 273 | 0.8345 |
0.8718 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P59203-F1-model_v4 | 1 | 266 | 1 | 266 | 0.9896 |
0.9954 |
| AF-P59204-F1-model_v4 | 1 | 266 | 1 | 266 | 0.9887 |
0.9947 |
| AF-Q99ZB6-F1-model_v4 | 1 | 261 | 4 | 271 | 0.8564 |
0.9021 |
| AF-O06992-F1-model_v4 | 1 | 264 | 4 | 280 | 0.7409 |
0.8068 |
| AF-P54485-F1-model_v4 | 2 | 266 | 1 | 251 | 0.5734 |
0.6197 |