PROTEIN: Rep_1119_c_14_34
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Protein File & Metadata
Source:
Rep_1119_c_14_34.pdb
Genome ID:
Protein ID:
Rep_1119_c_14_34
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Detailed structural information will appear here after analysis...
Protein Sequence
MKQIFKSREK LWVSLIIIAF AVLLVTPQLF TRKVILGSDS IFHYNRFYEA AMQLKNGNLS 60 YFLSLYGFQQ SGRIVNALYG PFFAYLQGGL ILISGTWFRY QIVSRVLLHI LAESSMYALL 120 KQCKVKTNIA LSLGLLYATT FSIQYWTMRQ GFSSWGAALL PFCFIPAIHY VFYQKVEPIR 180 LALSLALIFQ IHVLSALMLV MMYLPFYLYT FVKSPIAKKK ETFVQVVIAV ILFLLLTVNV 240 WLVLLYLRGT NHLLDPFINR EIGKNGIDGT ARYWLYTPIS LMVLLILQFI YAVLNWKKFA 300 KWKKILHFIY FIFFFLSTGL FPWQYLVENG NTFAELIQFP FRFFVPATIL LLAITGLTVT 360 RFVNWRKSIA VLLFAFAGVG LIQNMMDTTD LVKTAAQDGE LISIVKHTYV EGDYQTISLT 420 MNDSDLSQFL NLVVKPTPDY VPIYGKIGEQ NTYDLYYKNI VTNQKAKKII EDGYLVLTWQ 480 AAEGEKLNLP IVVYKDSILT LNGKELDKDD YNLSTIGTPT VSSQKGQNKL VLSYQEPGWL 540 FVALVIPIIV LGVIGLQWLY TKTSIKKVA 569
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1S8IUA0-F1-model_v4 | 1 | 569 | 5 | 566 | 0.9493 |
0.9651 |
| AF-A0A133CH43-F1-model_v4 | 4 | 564 | 1 | 544 | 0.8176 |
0.8518 |
| AF-A0A5P3FT45-F1-model_v4 | 3 | 569 | 1 | 540 | 0.8131 |
0.8501 |
| AF-A0A133CFT8-F1-model_v4 | 4 | 566 | 1 | 536 | 0.8035 |
0.8502 |
| AF-A0A133CH37-F1-model_v4 | 103 | 569 | 1 | 452 | 0.7234 |
0.8327 |
| AF-K0EVD5-F1-model_v4 | 1 | 569 | 3 | 727 | 0.6273 |
0.7234 |
| AF-K0EMA3-F1-model_v4 | 1 | 567 | 34 | 758 | 0.6263 |
0.7307 |
| AF-K0EUF9-F1-model_v4 | 6 | 568 | 1 | 723 | 0.624 |
0.7229 |
| AF-K0EV20-F1-model_v4 | 17 | 569 | 1 | 706 | 0.615 |
0.7174 |
| AF-A0A132Z547-F1-model_v4 | 1 | 569 | 3 | 872 | 0.6021 |
0.7408 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A160SZH0-F1-model_v4 | GT2 | 2 | 569 | 2 | 599 | 0.6478 |
0.7605 |
| AF-F2LXI8-F1-model_v4 | GT83 | 2 | 528 | 4 | 428 | 0.6296 |
0.7371 |
| AF-A4GJQ7-F1-model_v4 | GT0 | 5 | 531 | 4 | 440 | 0.6252 |
0.7243 |
| AF-A0A858ZP41-F1-model_v4 | GT83 | 1 | 528 | 7 | 505 | 0.6199 |
0.6799 |
| A0A8D4UV30 | GT83 | 5 | 465 | 3 | 442 | 0.6187 |
0.749 |
| AF-A0A5Q0C359-F1-model_v4 | GT83 | 1 | 530 | 10 | 466 | 0.6153 |
0.7181 |
| AF-A0A1S6H5E4-F1-model_v4 | GT39 | 2 | 398 | 1 | 402 | 0.6152 |
0.749 |
| A0A8D5JSU7 | GT83 | 1 | 530 | 1 | 491 | 0.6128 |
0.6748 |
| AF-A0A2U8FMR6-F1-model_v4 | GT83 | 2 | 535 | 8 | 488 | 0.6127 |
0.684 |
| AF-A0A5S9F4H0-F1-model_v4 | GT83 | 5 | 527 | 1 | 480 | 0.6118 |
0.6817 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A160SZH0 | GT2 | 2 | 569 | 2 | 599 | 0.6478 |
0.7605 |
| F2LXI8 | GT83 | 2 | 528 | 4 | 428 | 0.6296 |
0.7371 |
| A0A1B3X237 | GT83 | 5 | 465 | 1 | 437 | 0.6284 |
0.7608 |
| A0A518B1V8 | GT83 | 1 | 533 | 9 | 494 | 0.6268 |
0.6966 |
| A0A0K1PEQ4 | GT83 | 2 | 479 | 2 | 438 | 0.6223 |
0.7556 |
| A0A8D4UV30 | GT83 | 5 | 465 | 3 | 442 | 0.6187 |
0.749 |
| A0A8J2V5Q9 | GT83 | 1 | 535 | 7 | 518 | 0.6183 |
0.6705 |
| C9LV70 | GT83 | 2 | 464 | 1 | 444 | 0.618 |
0.7419 |
| I4BYW5 | GT83 | 1 | 479 | 1 | 450 | 0.616 |
0.7316 |
| A0A5Q0C359 | GT83 | 1 | 530 | 10 | 466 | 0.6153 |
0.7181 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42377-F1-model_v4 | 1 | 569 | 9 | 611 | 0.7549 |
0.7992 |
| AF-Q1MJ97-F1-model_v4 | 2 | 528 | 1 | 494 | 0.6112 |
0.6708 |
| AF-Q1MLH5-F1-model_v4 | 9 | 520 | 2 | 473 | 0.6021 |
0.6738 |
| AF-Q1MJ96-F1-model_v4 | 8 | 529 | 7 | 499 | 0.5977 |
0.6599 |
| AF-Q8NRZ6-F1-model_v4 | 3 | 395 | 28 | 507 | 0.5542 |
0.7586 |
| AF-P39007-F1-model_v4 | 1 | 464 | 7 | 569 | 0.5273 |
0.7141 |
| AF-P96419-F1-model_v4 | 5 | 565 | 2 | 1282 | 0.5038 |
0.7253 |