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PROTEIN: Rep_1106_c_9_41

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Protein File & Metadata
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Source:
Rep_1106_c_9_41.pdb
Genome ID:
Rep_1106
Protein ID:
Rep_1106_c_9_41

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNLLQNELKR   PTNLKRSSLW   YSIGTMTFAV   SSVFLLLVVT   RLEGANSAGI   FSIGWAVCQL 60
MYTIGLFGTR   SIQVSDLESR   YPDKIFFQSK   LVTIAAMLIG   SLIYSWILHF   SIEKYLISFL 120
LTLLMSAETL   GDAFSGFLQK   RERLDLSGKS   YFFRIITYDI   IFLLFLVATH   NMIVAIFAAC 180
VVSYLWLFLI   DYQWVRMIGY   LHIDFEFKTT   VYLLRECFPI   FISAFLTNYI   VNIPKNSIEL 240
FLSNDLQATY   NVLFMPSAII   TLFLSFVLVP   MYTQISSSWL   YRDLSKFKKI   VGRILFSITL 300
LTIFFALAGY   FIGIPILSVI   YHLNLSSFKS   QFVFLIIGGG   INSLATFLVY   ILTVFKRQKI 360
LTYVYLVTAI   FTTFISNTWV   KMHGITGASF   IYLVSISMIG   IFLIIISLIN   YAKLKNKRQ 419
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P71399-F1-model_v4 12 417 1 401 0.8412 0.8781
AF-P37746-F1-model_v4 12 416 6 415 0.8269 0.8712
AF-P26400-F1-model_v4 10 417 7 430 0.8205 0.8715
AF-Q2G1J8-F1-model_v4 13 419 5 401 0.8139 0.8617
AF-Q32EG2-F1-model_v4 15 408 3 396 0.8089 0.8562
AF-Q57484-F1-model_v4 12 418 1 404 0.8066 0.8438
AF-Q58770-F1-model_v4 12 416 1 415 0.8035 0.8486
AF-K0EXA3-F1-model_v4 11 419 29 445 0.8008 0.8705
AF-G3XD19-F1-model_v4 12 416 3 411 0.7998 0.8429
AF-K0F6P0-F1-model_v4 19 419 18 458 0.7983 0.8946
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 11 414 4 437 0.7686 0.8896
QNU38870.1 GT4 13 413 1 408 0.7004 0.8714
AF-A0A248VQW5-F1-model_v4 GT2 13 419 6 590 0.6709 0.8767
AF-A0A345VG16-F1-model_v4 GT2 3 419 261 685 0.6709 0.849
B1FZW0 GT2 13 419 6 591 0.6688 0.874
AF-A0A5B8KBR4-F1-model_v4 GT2 7 419 266 684 0.6608 0.8459
AF-A0A1P8M2V1-F1-model_v4 GT2 8 419 271 689 0.6568 0.8447
A0A836MCF6 GT100 12 419 1 498 0.6566 0.8536
A0A543Z557 GH16_5 1 415 22 437 0.6522 0.8472
A0A0J6W0G8 GH16_3 1 418 4 428 0.6452 0.8192
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 11 414 4 437 0.7686 0.8896
QNU38870.1 GT4 13 413 1 408 0.7004 0.8714
B1FZW0 GT2 13 419 6 591 0.6688 0.874
A0A836MCF6 GT100 12 419 1 498 0.6566 0.8536
A0A543Z557 GH16_5 1 415 22 437 0.6522 0.8472
A0A0J6W0G8 GH16_3 1 418 4 428 0.6452 0.8192
A0A975FPH4 GT4 14 419 1 515 0.6406 0.8628
A0A2W1ZQY8 GT4 13 419 1 817 0.6392 0.8734
A0A2U8PPB3 GT4 14 412 1 404 0.6368 0.8931
A0A1V0ABA3 GT4 7 418 379 790 0.6361 0.852
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fhz-assembly1.cif.gz_A 19 419 11 440 0.7906 0.8641
5y50-assembly1.cif.gz_A 15 419 11 441 0.6944 0.7657
5xjj-assembly1.cif.gz_A 15 419 12 442 0.6694 0.7404
6gwh-assembly1.cif.gz_A 12 419 3 440 0.6679 0.7296
4mlb-assembly1.cif.gz_C 12 419 4 452 0.6677 0.7364
6z70-assembly1.cif.gz_A 14 419 18 444 0.6676 0.7338
6hfb-assembly3.cif.gz_C 12 419 4 451 0.6659 0.7336
3wbn-assembly1.cif.gz_A 12 419 2 450 0.6635 0.7315
7php-assembly1.cif.gz_A 15 419 13 447 0.6623 0.7378
3w4t-assembly1.cif.gz_A 11 419 4 446 0.658 0.7214
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39855-F1-model_v4 14 412 1 396 0.891 0.9303
AF-P71399-F1-model_v4 12 417 1 401 0.8412 0.8781
AF-P37746-F1-model_v4 12 416 6 415 0.8269 0.8712
AF-Q45411-F1-model_v4 10 419 7 433 0.8247 0.8783
AF-Q99191-F1-model_v4 11 415 8 432 0.8221 0.8813
AF-P26400-F1-model_v4 10 417 7 430 0.8205 0.8715
AF-Q05347-F1-model_v4 10 419 2 436 0.8195 0.8744
AF-Q9CNC5-F1-model_v4 12 413 1 399 0.8159 0.8567
AF-P37781-F1-model_v4 13 416 2 418 0.8135 0.8633
AF-Q03583-F1-model_v4 15 408 3 396 0.8096 0.8567
Download Full SwissProt Results