PROTEIN: Rep_1089_c_30_60
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
Rep_1089_c_30_60.pdb
Genome ID:
Protein ID:
Rep_1089_c_30_60
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MRTFAQALFF DKDNIHTLEK DSEFKICKDD FLAPRKLGIS GHLRVKNEAR SVGLAIESAL 60 PALDELIITC QKHIDRSGMD ETYAICKDFA KKYPDKIKLF YYTPEVIAPN GSHVLNDSKE 120 ASKIKQKFLK NEKKRSLSSH IPANSVHSIA HYYNFGLTKT SYKYYIKIDG DHVYFTDKLL 180 ALRKNILKLD YLQTHRKSRL LGKFLEPFYA FLGSKLYLQK YLKFCMQING KCAFSLSGLN 240 IGKRAYETKV ALSKEELLSD EIYIPLVQNK HDGFCVLNAS DHVLLPIDPS VFYVLHDSGV 300 ENLRYGAKNI LFLGLFSFHY GMEKRDKRIN GIENIDYISL KNYLKTNQLD LLRLVKFDAK 360 GHLHRHLFGN IKHFKHIDDL IIEQFLK 387
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A3P7PX41-F1-model_v4 | 20 | 387 | 1 | 248 | 0.4965 |
0.7239 |
| AF-A0A044QXQ4-F1-model_v4 | 1 | 387 | 6 | 311 | 0.4935 |
0.6266 |
| AF-Q93834-F1-model_v4 | 1 | 387 | 41 | 415 | 0.4382 |
0.5256 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3B6VUH6 | GT0 | 14 | 387 | 1 | 386 | 0.7531 |
0.8056 |
| AF-A0A3B6VUH6-F1-model_v4 | GT0 | 14 | 387 | 1 | 386 | 0.7531 |
0.8056 |
| AF-A0A3B6V8W0-F1-model_v4 | GT0 | 14 | 387 | 1 | 386 | 0.7523 |
0.8051 |
| A0A139L135 | GT0 | 8 | 387 | 3 | 371 | 0.7268 |
0.7759 |
| A0A6A2S3W9 | GT0 | 36 | 387 | 1 | 354 | 0.7201 |
0.7766 |
| A0A496CQW3 | GT0 | 13 | 387 | 1 | 351 | 0.708 |
0.7726 |
| AF-A0A3B6VB38-F1-model_v4 | GT0 | 19 | 387 | 15 | 372 | 0.7058 |
0.7802 |
| BDR33666.1 | GT0 | 20 | 387 | 1 | 308 | 0.7009 |
0.8014 |
| AF-A3CYN7-F1-model_v4 | GT0 | 19 | 387 | 30 | 343 | 0.6584 |
0.7796 |
| AF-B6EHC3-F1-model_v4 | GT82 | 21 | 387 | 5 | 272 | 0.6533 |
0.8273 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A077DI38 | GT82 | 37 | 387 | 5 | 255 | 0.6488 |
0.8246 |
| ULO03174.1 | GT82 | 2 | 387 | 1 | 269 | 0.639 |
0.7757 |
| A0A6G7CMK6 | GT2 | 11 | 387 | 23 | 295 | 0.6257 |
0.7857 |
| A0A076LVK4 | GT2 | 1 | 387 | 30 | 340 | 0.6206 |
0.7326 |
| D0ZFM2 | GT82 | 21 | 387 | 5 | 272 | 0.6165 |
0.8234 |
| K9YP90 | GT2 | 12 | 387 | 29 | 310 | 0.6164 |
0.7605 |
| A0A1A9RFE1 | GT82 | 37 | 387 | 37 | 285 | 0.614 |
0.8344 |
| A0A162ITD6 | GT82 | 1 | 387 | 8 | 307 | 0.6075 |
0.7118 |
| A0A0F9YII5 | GT2 | 37 | 363 | 1 | 277 | 0.5612 |
0.6644 |
| UZR93201.1 | GT2 | 36 | 365 | 8 | 253 | 0.5587 |
0.718 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.