dbCAN Logo

PROTEIN: Rep_1087_c_45_3

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
Rep_1087_c_45_3.pdb
Genome ID:
Rep_1087
Protein ID:
Rep_1087_c_45_3

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MEDELIEEEE   DFLNKPDNDA   VIQKTCLNIN   PANGVIKEQR   YGKASVLLEV   TNKMVLDKQG 60
LVHSGYLFSS   AAYCALLAVN   EPNGIMIGAE   VKFLAPIELG   NEVLFRAETL   QEDTKKREVK 120
VEGFVLDIKI   FDAIFYVAVF   DKHVLSLHIT   KEMEKKMG 158
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O25174-F1-model_v4 17 156 6 141 0.8127 0.9097
AF-Q9HTY7-F1-model_v4 17 140 1 129 0.759 0.8899
AF-P76084-F1-model_v4 17 143 1 135 0.7581 0.9042
AF-A0A2K6VDW0-F1-model_v4 18 146 1 138 0.7579 0.888
AF-A0A0H3GMK1-F1-model_v4 18 143 3 135 0.7488 0.9
AF-X8F8S6-F1-model_v4 8 143 1 142 0.7409 0.8506
AF-Q2FZV4-F1-model_v4 28 146 3 124 0.7389 0.8831
AF-Q9HWT5-F1-model_v4 16 143 1 138 0.7376 0.8701
AF-Q9HX45-F1-model_v4 18 146 5 143 0.7297 0.8685
AF-A0A183XLS8-F1-model_v4 16 147 1 140 0.727 0.8421
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160SZQ6-F1-model_v4 GT2 20 150 1 158 0.6551 0.814
AF-A0A514CI65-F1-model_v4 CE11 2 147 62 464 0.5108 0.833
AF-I3ZAD8-F1-model_v4 CE11 2 147 61 464 0.5093 0.8299
AF-A0A6G8C6M5-F1-model_v4 CE11 1 147 20 464 0.5079 0.8227
AF-A0A1W2H440-F1-model_v4 CE11 1 147 19 464 0.5054 0.8178
AF-A0A5C0VLR0-F1-model_v4 CE11 1 154 19 470 0.5052 0.7879
AF-A0A2Z4ILT4-F1-model_v4 CE11 2 147 61 464 0.5047 0.8221
AF-G0J4N1-F1-model_v4 CE11 1 147 104 464 0.5031 0.815
AF-A0A0H4P7Y8-F1-model_v4 CE11 2 147 63 464 0.5013 0.8164
AF-A0A0D3LC78-F1-model_v4 CE11 3 147 62 465 0.4996 0.8196
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160SZQ6 GT2 20 150 1 158 0.6551 0.814
A0A518B445 CE11 1 146 210 474 0.4791 0.7865
D2RLU3 CE11 11 146 285 445 0.4771 0.8204
B0VJ33 CE11 12 146 132 464 0.4723 0.8259
A0A172U2E8 CE11 11 154 1 474 0.4707 0.7811
A0A142YKQ2 CE11 21 146 296 447 0.4619 0.8544
G8LR83 CE11 20 146 281 424 0.4583 0.8275
I3QHC8 CE11 2 150 115 448 0.4576 0.7218
H6LA12 CE11 20 146 318 461 0.4562 0.8433
B3ER75 CE11 20 150 320 464 0.456 0.8209
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
1ixl-assembly1.cif.gz_A 17 146 1 130 0.8697 0.9686
3bnv-assembly4.cif.gz_H 21 146 4 130 0.8435 0.9687
3lwg-assembly1.cif.gz_A 21 140 1 120 0.8297 0.9589
3lw3-assembly1.cif.gz_A 21 140 2 121 0.8269 0.9598
3bnv-assembly2.cif.gz_C 20 146 13 142 0.8156 0.9729
3bnv-assembly1.cif.gz_B 17 147 9 137 0.8117 0.9349
3lwg-assembly1.cif.gz_B 20 148 11 141 0.8004 0.94
3lw3-assembly1.cif.gz_B 20 148 12 136 0.7862 0.9374
4a0y-assembly1.cif.gz_B-2 28 142 5 118 0.7743 0.9355
1wlu-assembly1.cif.gz_A 23 140 1 117 0.7727 0.9079
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76084-F1-model_v4 17 143 1 135 0.7581 0.9042
AF-Q976X8-F1-model_v4 22 150 2 137 0.743 0.8681
AF-P95914-F1-model_v4 20 148 5 140 0.7363 0.8657
AF-P14205-F1-model_v4 23 142 1 126 0.7304 0.8744
AF-Q96ZP3-F1-model_v4 21 142 1 133 0.7297 0.883
AF-Q9HLD5-F1-model_v4 21 141 1 132 0.7187 0.8761
AF-O28020-F1-model_v4 17 143 12 149 0.7147 0.8932
AF-Q8ZXD8-F1-model_v4 18 143 1 144 0.7146 0.8801
AF-Q8ZR29-F1-model_v4 17 141 1 137 0.7128 0.8563
AF-B5QVK0-F1-model_v4 17 141 1 137 0.7124 0.8558
Download Full SwissProt Results