PROTEIN: Rep_1054_c_187_3
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Protein File & Metadata
Source:
Rep_1054_c_187_3.pdb
Genome ID:
Protein ID:
Rep_1054_c_187_3
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Protein Sequence
MMMSNSTRDG LSFGEFLLAL GRYWYIWLVT ALIVTAGAFA WGKRTTVPTY SASSTVMIYH 60 PNNDPNQRNA DILAMASYRQ LAKSNMIVQP VQEQLLKVKG YQGSIDTLTA GISTSVAQNT 120 LNLQLKVQGS SPKLAAQTAN LLAKSVQQHL SQLVPNTGSV QVVEQAAAKR STLINGNRVQ 180 KLTLGGLLFG LYLGVLATFI YTAWRR 206
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K8-F1-model_v4 | 11 | 206 | 5 | 199 | 0.61 |
0.7033 |
| AF-Q2FUV1-F1-model_v4 | 10 | 206 | 6 | 198 | 0.5907 |
0.6837 |
| AF-A0A133CF17-F1-model_v4 | 13 | 206 | 8 | 203 | 0.5754 |
0.7053 |
| AF-K0EZX4-F1-model_v4 | 11 | 206 | 1 | 200 | 0.5464 |
0.7938 |
| AF-K0EV96-F1-model_v4 | 12 | 206 | 5 | 388 | 0.4815 |
0.6937 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| URM97002.1 | GT4 | 7 | 206 | 375 | 583 | 0.4088 |
0.6359 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| URM97002.1 | GT4 | 7 | 206 | 375 | 583 | 0.4088 |
0.6359 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71050-F1-model_v4 | 7 | 206 | 1 | 201 | 0.7372 |
0.8307 |
| AF-P95695-F1-model_v4 | 11 | 206 | 5 | 199 | 0.6126 |
0.7061 |
| AF-P72367-F1-model_v4 | 11 | 206 | 5 | 199 | 0.6115 |
0.7046 |
| AF-P96715-F1-model_v4 | 10 | 206 | 5 | 202 | 0.6098 |
0.7241 |
| AF-P63858-F1-model_v4 | 10 | 206 | 6 | 198 | 0.5928 |
0.6864 |
| AF-P63859-F1-model_v4 | 10 | 206 | 5 | 198 | 0.5907 |
0.6817 |
| AF-Q6GDE0-F1-model_v4 | 10 | 206 | 5 | 197 | 0.5875 |
0.6801 |
| AF-Q5HCN3-F1-model_v4 | 11 | 206 | 6 | 198 | 0.5855 |
0.6779 |
| AF-Q9RQQ1-F1-model_v4 | 10 | 206 | 5 | 198 | 0.5839 |
0.6742 |
| AF-Q6G610-F1-model_v4 | 10 | 206 | 6 | 197 | 0.5831 |
0.6791 |