PROTEIN: Rep_1004_c_30_49
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Protein File & Metadata
Source:
Rep_1004_c_30_49.pdb
Genome ID:
Protein ID:
Rep_1004_c_30_49
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Protein Sequence
MTKPAFLITI DTEGDNLWQN HDRIATENTR FLPRFQALCE KYAFKPVYLT NYEMAMDPAY 60 VEFARDVIAR GAGEVGMHLH AWNSPPLTPL TDDDWRHKPY LIEYPADQIR AKVDHMTKLL 120 EDAFQTKMLS HRAGRWAFNE YYASLLLEYG YQVDCSVTPR VNWQFSPGNP QGNGGTDYSR 180 FPSQAYFIDP QNIAKPGASA LLEVPMSIQY KHSALMNAFK QGYDRLRGKR RSPSVNWLRP 240 SGGNVAKMIG VAEASLAQGH DYVEFMLHSS EFMPGGSPTF KTEQDIEVLY RDLEQLFDWL 300 QQRTVGMTLA EYYQLKAN 318
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A0H3GXC6-F1-model_v4 | 1 | 318 | 1 | 318 | 0.9908 |
0.9983 |
| AF-K0ENC6-F1-model_v4 | 1 | 318 | 31 | 293 | 0.6845 |
0.8042 |
| AF-O25080-F1-model_v4 | 1 | 318 | 2 | 287 | 0.6811 |
0.7404 |
| AF-A0A175W0Y0-F1-model_v4 | 1 | 318 | 6 | 268 | 0.6786 |
0.7794 |
| AF-A0A0D2DF04-F1-model_v4 | 1 | 318 | 2 | 289 | 0.6783 |
0.7438 |
| AF-A0A0D2FHJ4-F1-model_v4 | 1 | 318 | 2 | 287 | 0.6776 |
0.746 |
| AF-A0A0D2GZ69-F1-model_v4 | 1 | 318 | 3 | 290 | 0.672 |
0.7398 |
| AF-K0EZL7-F1-model_v4 | 1 | 318 | 17 | 278 | 0.6716 |
0.7887 |
| AF-C0P192-F1-model_v4 | 1 | 318 | 3 | 288 | 0.6703 |
0.7504 |
| AF-Q8ZM25-F1-model_v4 | 1 | 318 | 9 | 279 | 0.6634 |
0.7758 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCQ47528.1 | GT9 | 1 | 318 | 1 | 318 | 0.7308 |
0.9975 |
| AF-A0A0K1JPV0-F1-model_v4 | CE4 | 1 | 318 | 7 | 199 | 0.6691 |
0.8654 |
| AF-A0A345BWG7-F1-model_v4 | CE4 | 1 | 318 | 15 | 292 | 0.6646 |
0.7447 |
| AF-E4T6X2-F1-model_v4 | CE4 | 1 | 318 | 3 | 244 | 0.6622 |
0.7762 |
| AF-A0A0H4I361-F1-model_v4 | CE4 | 1 | 318 | 19 | 296 | 0.6594 |
0.743 |
| AF-Q09LZ1-F1-model_v4 | CE4 | 1 | 318 | 7 | 202 | 0.6551 |
0.8451 |
| ULQ60020.1 | GH57 | 1 | 318 | 2 | 262 | 0.6531 |
0.7776 |
| AF-A0A6N0JUF5-F1-model_v4 | CE4 | 1 | 318 | 27 | 298 | 0.6499 |
0.7537 |
| AF-Q28JS9-F1-model_v4 | CE4 | 1 | 318 | 18 | 295 | 0.6491 |
0.7374 |
| AF-Q2W7D0-F1-model_v4 | CE4 | 1 | 318 | 1 | 245 | 0.6483 |
0.7533 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| BCQ47528.1 | GT9 | 1 | 318 | 1 | 318 | 0.7308 |
0.9975 |
| A0A0K1JPV0 | CE4 | 1 | 318 | 7 | 199 | 0.6691 |
0.8654 |
| A0A142LIT0 | CE4 | 1 | 318 | 20 | 296 | 0.6654 |
0.7539 |
| E4T6X2 | CE4 | 1 | 318 | 3 | 244 | 0.6622 |
0.7762 |
| A0A1P8UIT3 | CE4 | 1 | 318 | 24 | 300 | 0.6577 |
0.7495 |
| A0A1M6K3L2 | CE4 | 1 | 318 | 24 | 297 | 0.6538 |
0.7531 |
| ULQ60020.1 | GH57 | 1 | 318 | 2 | 262 | 0.6531 |
0.7776 |
| A0A1W6YG18 | CE4 | 1 | 318 | 25 | 301 | 0.6499 |
0.751 |
| Q2W7D0 | CE4 | 1 | 318 | 1 | 245 | 0.6483 |
0.7533 |
| A0A4D7QKB1 | CE4 | 1 | 318 | 31 | 302 | 0.6451 |
0.767 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3rxz-assembly1.cif.gz_B | 1 | 318 | 13 | 273 | 0.6865 |
0.8028 |
| 3qbu-assembly1.cif.gz_C | 1 | 318 | 1 | 286 | 0.6829 |
0.7386 |
| 8t0j-assembly1.cif.gz_A | 3 | 318 | 1 | 245 | 0.6457 |
0.7824 |
| 3lm3-assembly1.cif.gz_A | 1 | 318 | 6 | 317 | 0.6344 |
0.7571 |
| 5wu7-assembly1.cif.gz_A | 2 | 318 | 1 | 376 | 0.523 |
0.6628 |
| 2b5d-assembly1.cif.gz_X | 1 | 318 | 1 | 391 | 0.5214 |
0.6531 |
| 1k1w-assembly1.cif.gz_A | 4 | 318 | 1 | 244 | 0.4667 |
0.7939 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5ZA76-F1-model_v4 | 1 | 318 | 2 | 287 | 0.6907 |
0.7503 |
| AF-O25080-F1-model_v4 | 1 | 318 | 2 | 287 | 0.6811 |
0.7404 |
| AF-I1S2J6-F1-model_v4 | 1 | 318 | 37 | 332 | 0.6265 |
0.7061 |
| AF-A4SQX0-F1-model_v4 | 3 | 318 | 1 | 275 | 0.6196 |
0.708 |
| AF-A0KGY5-F1-model_v4 | 3 | 318 | 1 | 275 | 0.6183 |
0.7067 |
| AF-Q02R26-F1-model_v4 | 3 | 318 | 1 | 272 | 0.618 |
0.7088 |
| AF-A6V1N9-F1-model_v4 | 3 | 318 | 1 | 272 | 0.6178 |
0.7086 |
| AF-Q7N3Q8-F1-model_v4 | 3 | 318 | 1 | 272 | 0.6178 |
0.7105 |
| AF-Q2NRV8-F1-model_v4 | 3 | 318 | 1 | 271 | 0.6171 |
0.7124 |
| AF-Q6D2F2-F1-model_v4 | 3 | 318 | 1 | 273 | 0.6167 |
0.7066 |