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PROTEIN: Rep_1004_c_27_651

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Protein File & Metadata
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Source:
Rep_1004_c_27_651.pdb
Genome ID:
Rep_1004
Protein ID:
Rep_1004_c_27_651

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Detailed structural information will appear here after analysis...

Protein Sequence 
MRGMYQRVVL   GCCALWGASA   LAQSCQPNLL   ANPGFEQGLG   GWRAQGAQAD   GDTHSGNGSL 60
RYDNADAAQY   RTFNQALQVA   PGQTIDFGVW   LKTRGVRGQS   RDGGAGVYLQ   SFDAQGRFLE 120
GSYPAGVTGD   SGWRQVNASY   TVPPQAARIT   FGVYLRKGST   GTAWFDDAYA   CARAPTPALY 180
QLGASAQGKV   DTLVVTSQPQ   RLQVDSELLN   AEGQVVHRSR   DRYQVEGQRR   IEYQPPTGLA 240
QGEYRLRQQV   TGQQSRPAPD   SELSFRVGQP   AAKVAIDSEG   FTLRDGQRLF   PLGIYANVAT 300
DEHLARIASA   GFNTVLNYDY   GEKKDPYAFF   RNARQRGLLV   IYSVKDQYRG   SRFAPAVRGG 360
DYAAMTAWYV   QRLRSQPNLL   AWYINDELGP   EYLDKIEEKN   LQIKRLDGDH   PTFQVLNKTG 420
ELDAHFNSSD   ILATDPYPVG   NDRDLTRTTR   YTELTVQAAR   QARGAWVVMQ   IMDHAAYDAR 480
RKPHPPSEAE   IRNQAWQALI   GGAKGLLFYS   YTDLFYKRKT   GRFDQREFDA   TWRVVAAVSQ 540
QIAAFTPYLL   TGKSTPLAGS   NPQMPARMFV   LGDRALLLVA   NPYYREESTR   LRLPAGWRQR 600
EGGAEIQLAL   PAVGTATLWL   QR 622
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A175VZB8-F1-model_v4 3 622 5 562 0.5947 0.6416
AF-U7Q0B0-F1-model_v4 2 622 4 646 0.5749 0.5984
AF-A0A0H3GTX2-F1-model_v4 278 622 1 540 0.4876 0.7932
AF-A0A1C1D3E4-F1-model_v4 205 620 5 636 0.4746 0.7009
AF-A0A0D2GWR6-F1-model_v4 205 620 5 635 0.474 0.6988
AF-P08195-F1-model_v4 67 622 44 629 0.4601 0.5243
AF-Q9I1W4-F1-model_v4 176 622 32 661 0.46 0.6464
AF-K0EUG4-F1-model_v4 177 622 14 651 0.4515 0.6376
AF-Q54S16-F1-model_v4 279 622 51 731 0.4164 0.7912
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7S4H3P1-F1-model_v4 CBM16 , GH0 18 622 15 610 0.7886 0.8335
AF-A0A2S0KQW4-F1-model_v4 GH5 20 571 14 514 0.6418 0.7313
AF-A0A2S0KQU9-F1-model_v4 GH5 22 550 14 514 0.6352 0.7249
AF-A0A2S0KYV1-F1-model_v4 GH5 23 547 19 501 0.5914 0.6892
AF-W0IV90-F1-model_v4 GH5 17 547 24 523 0.5912 0.6869
AF-A0A2S0KZB6-F1-model_v4 GH5 20 547 15 503 0.5869 0.6796
AF-A0A286RCT9-F1-model_v4 GH5 24 547 22 521 0.5773 0.671
AF-A0A1D9PF14-F1-model_v4 GH140 272 622 33 466 0.5586 0.8438
AF-A0A2S0KXG2-F1-model_v4 GH5 20 547 25 515 0.5507 0.6432
AF-A0A2S0KTM9-F1-model_v4 GH5 20 547 32 522 0.5387 0.6322
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7S4H3P1 CBM16 , GH0 18 622 15 610 0.7886 0.8335
A0A2S0KQU9 GH5 22 550 14 514 0.6352 0.7249
W0IV90 GH5 17 547 24 523 0.5912 0.6869
A0A2S0KZB6 GH5 20 547 15 503 0.5869 0.6796
A0A286RCT9 GH5 24 547 22 521 0.5773 0.671
A0A2S0KXU7 GH5 17 546 37 530 0.5727 0.6735
A0A2S0KTY4 GH5 20 547 21 504 0.5704 0.6659
P14898 GH13_20 116 622 2 562 0.56 0.6602
I0HZS7 GH13_20 117 621 1 595 0.5532 0.6711
A0A2S0KTM9 GH5 20 547 32 522 0.5387 0.6322
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5msy-assembly3.cif.gz_C 271 622 8 439 0.5709 0.8423
4qfu-assembly4.cif.gz_D 271 622 9 436 0.5695 0.8459
4qfu-assembly3.cif.gz_C 271 622 8 438 0.569 0.846
4qfu-assembly8.cif.gz_H 271 622 8 439 0.5677 0.8461
4qfu-assembly12.cif.gz_L 271 622 8 442 0.5664 0.8461
4qfu-assembly6.cif.gz_F 271 622 13 444 0.565 0.8457
2d2o-assembly1.cif.gz_A 80 622 4 585 0.4973 0.5618
1wzk-assembly1.cif.gz_A 80 622 4 585 0.4956 0.5596
1wzl-assembly1.cif.gz_A 80 622 4 585 0.4954 0.5594
1wzm-assembly1.cif.gz_A 80 622 4 585 0.495 0.559
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P14898-F1-model_v4 112 622 2 562 0.5573 0.6519
AF-Q08341-F1-model_v4 80 622 5 587 0.4968 0.5632
AF-Q08751-F1-model_v4 80 622 4 585 0.4963 0.5604
AF-P38940-F1-model_v4 81 622 4 587 0.4946 0.5607
AF-Q6L2Z8-F1-model_v4 176 622 14 629 0.4664 0.6435
AF-Q60053-F1-model_v4 182 620 52 666 0.4636 0.6645
AF-P08195-F1-model_v4 67 622 44 629 0.4601 0.5243
AF-Q9I1W4-F1-model_v4 176 622 32 661 0.46 0.6464
AF-Q2S498-F1-model_v4 176 622 18 646 0.4568 0.6449
AF-Q9KY04-F1-model_v4 176 622 22 654 0.4509 0.638
Download Full SwissProt Results