PROTEIN: Rep_1004_c_17_31
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Protein File & Metadata
Source:
Rep_1004_c_17_31.pdb
Genome ID:
Protein ID:
Rep_1004_c_17_31
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Protein Sequence
MKSLSHHALL PLLLLVNAPA WAAQEPVTPA ERNQLPPPPL PDSAATALRF YGELGIGGSV 60 YLNGEHQHQY SDGTYIEGGL EIKRGHWFGL IYGEGWTVQA DNQGHAWTPG HGWGGFEGGL 120 NRFYGGYRTD DGTEMMLSVR NDSSLDDLQW WGDFTPEYGY VIPNTRDLSY AAKLQNLTGR 180 FRYSLTAAPE SRINESKALL HFGKYDRYSD KYTYRAMVNG YTQYDLQDNL TLLNGLEVTD 240 GLGQLFLLGL RGQHLAGRVW HHTGKGDSGG HPGSESGLML SAMTETAKGL YLSTAYSYAR 300 HRFDNAADTA TSYAQFGVWY EYAGGKLATA LDSKFFMRND STGASNSVFL MQYFYW 356
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 31 | 356 | 31 | 356 | 0.9001 |
0.9877 |
| AF-P37432-F1-model_v4 | 22 | 356 | 7 | 363 | 0.7501 |
0.8188 |
| AF-P30705-F1-model_v4 | 23 | 356 | 7 | 350 | 0.745 |
0.8031 |
| AF-Q32E50-F1-model_v4 | 24 | 356 | 9 | 362 | 0.7407 |
0.813 |
| AF-P02931-F1-model_v4 | 24 | 356 | 9 | 362 | 0.7391 |
0.8115 |
| AF-P21420-F1-model_v4 | 24 | 356 | 10 | 365 | 0.7362 |
0.8105 |
| AF-A0A0H3H0Y2-F1-model_v4 | 24 | 356 | 8 | 367 | 0.7361 |
0.8129 |
| AF-P37592-F1-model_v4 | 24 | 356 | 9 | 362 | 0.7351 |
0.8063 |
| AF-P06996-F1-model_v4 | 24 | 356 | 8 | 367 | 0.7322 |
0.8085 |
| AF-Q8ZPL4-F1-model_v4 | 24 | 356 | 8 | 377 | 0.7252 |
0.8107 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 6ehb-assembly1.cif.gz_C | 28 | 356 | 1 | 320 | 0.7482 |
0.8009 |
| 3nsg-assembly1.cif.gz_C | 37 | 356 | 1 | 341 | 0.7461 |
0.8247 |
| 5o78-assembly1.cif.gz_C | 44 | 356 | 1 | 331 | 0.745 |
0.8286 |
| 4kr4-assembly1.cif.gz_B | 37 | 356 | 1 | 340 | 0.7446 |
0.822 |
| 6ene-assembly1.cif.gz_C | 37 | 356 | 1 | 329 | 0.7445 |
0.8101 |
| 4kra-assembly1.cif.gz_B | 37 | 356 | 1 | 340 | 0.7438 |
0.8215 |
| 4kr8-assembly1.cif.gz_B | 37 | 356 | 1 | 340 | 0.7437 |
0.8209 |
| 5o77-assembly1.cif.gz_A | 37 | 356 | 1 | 337 | 0.7425 |
0.8169 |
| 4kra-assembly1.cif.gz_C | 37 | 356 | 1 | 337 | 0.7424 |
0.8168 |
| 5onu-assembly1.cif.gz_C | 29 | 356 | 1 | 319 | 0.7422 |
0.7973 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P42591-F1-model_v4 | 31 | 356 | 31 | 356 | 0.9001 |
0.9877 |
| AF-Q56113-F1-model_v4 | 22 | 356 | 6 | 363 | 0.7547 |
0.8234 |
| AF-A0A0H3N9T8-F1-model_v4 | 22 | 356 | 6 | 363 | 0.7537 |
0.8225 |
| AF-J9RX10-F1-model_v4 | 24 | 356 | 8 | 357 | 0.7518 |
0.8191 |
| AF-P37432-F1-model_v4 | 22 | 356 | 7 | 363 | 0.7501 |
0.8188 |
| AF-Q47490-F1-model_v4 | 24 | 356 | 8 | 350 | 0.7486 |
0.8095 |
| AF-Q56119-F1-model_v4 | 24 | 356 | 8 | 350 | 0.7457 |
0.8059 |
| AF-P30705-F1-model_v4 | 23 | 356 | 7 | 350 | 0.745 |
0.8031 |
| AF-P29739-F1-model_v4 | 24 | 356 | 7 | 326 | 0.7447 |
0.8045 |
| AF-A0A4P7TN82-F1-model_v4 | 24 | 356 | 9 | 362 | 0.7418 |
0.8141 |