PROTEIN: RavehSadkaT_2016_SRR6257474_bin.5_k119_964_4
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Protein File & Metadata
Source:
RavehSadkaT_2016_SRR6257474_bin.5_k119_964_4.pdb
Genome ID:
Protein ID:
RavehSadkaT_2016_SRR6257474_bin.5_k119_964_4
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Protein Sequence
MNYKELNNTF KKLSKWYGKK IKVLNLKTRP FNSIEIFSNI INKVLNENKN ILYVFCSEEK 60 EHIKVRINEI YEFLDNTISK KQLDNNIHFA NIGDIEDIDE SYDLVIVDDI SLFSKISNEY 120 VRESIENIYW KSNKIIIYSS EYIFPIGEKI ELPYILSDEP MVEPRLMSTR IRLEENIPLS 180 LFEYFKWFKE SKRIVLVVVP SEEKLNKVYN HYYKVLRELD IRVVRYTKNQ DFNFIKEIID 240 GYSDSLFIVT NNCGQYMNNI LNLNIIILFA DDIYYSSKRI VYMCASLDNS REVQSELIMV 300 SREVSQDMDY AKNITREFNK RLWEK 325
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A242AJW1-F1-model_v4 | 1 | 325 | 19 | 357 | 0.7756 |
0.8335 |
| AF-Q8CWM9-F1-model_v4 | 1 | 324 | 94 | 432 | 0.7115 |
0.8289 |
| AF-Q2G057-F1-model_v4 | 25 | 325 | 1 | 308 | 0.7024 |
0.7683 |
| AF-Q10055-F1-model_v4 | 1 | 316 | 41 | 381 | 0.5921 |
0.6876 |
| AF-Q384F2-F1-model_v4 | 1 | 316 | 50 | 388 | 0.5886 |
0.6885 |
| AF-C0NT99-F1-model_v4 | 1 | 317 | 45 | 386 | 0.5869 |
0.6822 |
| AF-O33011-F1-model_v4 | 1 | 324 | 33 | 556 | 0.5849 |
0.7682 |
| AF-A0A0K0EF79-F1-model_v4 | 1 | 316 | 60 | 400 | 0.5843 |
0.6903 |
| AF-P9WL21-F1-model_v4 | 1 | 323 | 40 | 500 | 0.5842 |
0.7715 |
| AF-I1L171-F1-model_v4 | 1 | 317 | 55 | 395 | 0.5839 |
0.6841 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S0V5L2 | GH92 | 1 | 317 | 196 | 620 | 0.5468 |
0.7814 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A1S0V5L2 | GH92 | 1 | 317 | 196 | 620 | 0.5468 |
0.7814 |
| WFD20538.1 | GH5 | 1 | 325 | 43 | 710 | 0.44 |
0.6783 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2fdc-assembly1.cif.gz_A | 1 | 325 | 11 | 488 | 0.6464 |
0.7972 |
| 1c4o-assembly1.cif.gz_A | 1 | 325 | 7 | 493 | 0.636 |
0.785 |
| 8oos-assembly1.cif.gz_G | 1 | 322 | 8 | 437 | 0.6251 |
0.7419 |
| 1t5l-assembly2.cif.gz_B | 1 | 325 | 11 | 577 | 0.6189 |
0.8086 |
| 6o8g-assembly1.cif.gz_A | 1 | 325 | 10 | 559 | 0.6166 |
0.7918 |
| 7oop-assembly1.cif.gz_b | 1 | 321 | 17 | 481 | 0.614 |
0.7827 |
| 8b3f-assembly1.cif.gz_b | 1 | 321 | 17 | 481 | 0.6138 |
0.7825 |
| 6m6b-assembly1.cif.gz_M | 1 | 322 | 89 | 431 | 0.5994 |
0.7243 |
| 2nmv-assembly1.cif.gz_A | 1 | 325 | 8 | 574 | 0.5927 |
0.786 |
| 5lb8-assembly2.cif.gz_D | 1 | 322 | 15 | 401 | 0.5902 |
0.6931 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39145-F1-model_v4 | 1 | 325 | 120 | 459 | 0.6979 |
0.833 |
| AF-Q10055-F1-model_v4 | 1 | 316 | 41 | 381 | 0.5921 |
0.6876 |
| AF-Q1DTB3-F1-model_v4 | 1 | 317 | 5 | 386 | 0.5862 |
0.6828 |
| AF-O33011-F1-model_v4 | 1 | 324 | 33 | 556 | 0.5849 |
0.7682 |
| AF-P9WL21-F1-model_v4 | 1 | 323 | 40 | 500 | 0.5842 |
0.7715 |
| AF-A4W1F7-F1-model_v4 | 1 | 325 | 16 | 582 | 0.5834 |
0.7896 |
| AF-C1CKX8-F1-model_v4 | 1 | 325 | 16 | 582 | 0.5831 |
0.7896 |
| AF-Q8E471-F1-model_v4 | 1 | 325 | 16 | 582 | 0.5831 |
0.79 |
| AF-B5E4X3-F1-model_v4 | 1 | 325 | 16 | 582 | 0.583 |
0.7895 |
| AF-Q8DPK7-F1-model_v4 | 1 | 325 | 16 | 582 | 0.5829 |
0.7894 |