PROTEIN: RavehSadkaT_2016_SRR6257474_bin.5_k119_5244_38
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Protein File & Metadata
Source:
RavehSadkaT_2016_SRR6257474_bin.5_k119_5244_38.pdb
Genome ID:
Protein ID:
RavehSadkaT_2016_SRR6257474_bin.5_k119_5244_38
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Protein Sequence
MEEQGMILED FYIAVKKRWI MILVLILVPI LIVLFKPKGI IIQEYEASTK LYVIRTDLET 60 IADSPKGSIE YNLLNSFVES LKTNKTIEEA LENANSTLTI EEVSSKIYAG IFQDSNVVDL 120 SLSGTDEREI IRILDEIVKI AEKTVTNYIP NSEMSAIDTI TASEVSSINS GDNVKKLILI 180 FGAMTFIALL LAVTLEYLDD SFKHEDQIEK TLKEPVLAIF SKKNKNNKII YNKIVTNILY 240 NHKDMNNILI SATTNNEGKD EFVEEVARAI AEKGNNILVI DVDRGLSENN EIKKIMEVED 300 VNKLIIKKEY DLLSINNDSL SEDNIKKLFI SLDGKYQYIL INGTPINNGV LSQCFAKEVD 360 GTIYIVKGYK NKRKVVLRSI NELKAYNSNI IGIVLNNIEA 400
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EZX4-F1-model_v4 | 5 | 400 | 1 | 437 | 0.7292 |
0.7983 |
| AF-K0EV96-F1-model_v4 | 5 | 400 | 1 | 414 | 0.7197 |
0.774 |
| AF-A0A0H3GVU7-F1-model_v4 | 1 | 400 | 11 | 707 | 0.614 |
0.7964 |
| AF-Q32HS6-F1-model_v4 | 1 | 400 | 11 | 718 | 0.6092 |
0.793 |
| AF-P38134-F1-model_v4 | 1 | 400 | 12 | 715 | 0.6027 |
0.7841 |
| AF-P76387-F1-model_v4 | 2 | 400 | 11 | 700 | 0.576 |
0.7505 |
| AF-Q9F7B1-F1-model_v4 | 5 | 400 | 13 | 699 | 0.5499 |
0.7201 |
| AF-Q9I1N4-F1-model_v4 | 3 | 400 | 1 | 645 | 0.5231 |
0.6633 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A7H8KQB2-F1-model_v4 | GT4 | 6 | 400 | 1 | 511 | 0.5201 |
0.7514 |
| UBM63584.1 | CBM50 | 6 | 400 | 1 | 944 | 0.5059 |
0.7304 |
| AF-A0A8B0SMZ4-F1-model_v4 | GT4 | 1 | 400 | 418 | 1115 | 0.4803 |
0.7123 |
| WGH78710.1 | PL1_2 | 1 | 400 | 27 | 682 | 0.4711 |
0.7025 |
| A0A2L0WKS9 | GT0 | 1 | 400 | 17 | 763 | 0.4706 |
0.6913 |
| AF-A0A2L0WKS9-F1-model_v4 | GT0 | 1 | 400 | 17 | 763 | 0.4706 |
0.6913 |
| QTR45648.1 | GT4 | 1 | 400 | 418 | 1132 | 0.4684 |
0.6937 |
| AF-A0A387H7L2-F1-model_v4 | GT0 | 1 | 400 | 4 | 760 | 0.4622 |
0.6778 |
| AF-A0A0B4X6N3-F1-model_v4 | GT0 | 1 | 400 | 14 | 760 | 0.443 |
0.6501 |
| AF-A0A1L5NL39-F1-model_v4 | GT0 | 1 | 398 | 15 | 753 | 0.4248 |
0.6259 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7H8KQB2 | GT4 | 6 | 400 | 1 | 511 | 0.5201 |
0.7514 |
| UBM63584.1 | CBM50 | 6 | 400 | 1 | 944 | 0.5059 |
0.7304 |
| WGH78710.1 | PL1_2 | 1 | 400 | 27 | 682 | 0.4711 |
0.7025 |
| QTR45648.1 | GT4 | 1 | 400 | 418 | 1132 | 0.4684 |
0.6937 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 7nib-assembly1.cif.gz_E | 5 | 400 | 1 | 512 | 0.6383 |
0.7422 |
| 7nib-assembly1.cif.gz_F | 5 | 400 | 1 | 507 | 0.6371 |
0.7376 |
| 7nhs-assembly1.cif.gz_A | 5 | 400 | 1 | 514 | 0.6294 |
0.7325 |
| 7nhr-assembly1.cif.gz_G | 2 | 400 | 1 | 556 | 0.6199 |
0.7382 |
| 7nii-assembly1.cif.gz_H | 5 | 400 | 1 | 557 | 0.6193 |
0.7435 |
| 4jlv-assembly1.cif.gz_A | 199 | 398 | 1 | 228 | 0.6185 |
0.9012 |
| 3bfv-assembly2.cif.gz_B | 199 | 400 | 1 | 241 | 0.6123 |
0.9132 |
| 2ved-assembly1.cif.gz_B | 199 | 400 | 1 | 242 | 0.592 |
0.909 |
| 7nii-assembly1.cif.gz_A | 5 | 400 | 1 | 655 | 0.5899 |
0.7504 |
| 3la6-assembly2.cif.gz_M | 199 | 400 | 1 | 238 | 0.5772 |
0.8896 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O52788-F1-model_v4 | 2 | 400 | 8 | 709 | 0.6363 |
0.8319 |
| AF-Q8XC28-F1-model_v4 | 1 | 400 | 11 | 717 | 0.6036 |
0.7857 |
| AF-P58764-F1-model_v4 | 1 | 400 | 11 | 717 | 0.6034 |
0.7853 |
| AF-P38134-F1-model_v4 | 1 | 400 | 12 | 715 | 0.6027 |
0.7841 |
| AF-Q46631-F1-model_v4 | 2 | 400 | 11 | 713 | 0.6 |
0.7824 |
| AF-Q48452-F1-model_v4 | 2 | 400 | 9 | 711 | 0.5906 |
0.7692 |
| AF-P58593-F1-model_v4 | 4 | 400 | 15 | 717 | 0.5845 |
0.7743 |
| AF-P76387-F1-model_v4 | 2 | 400 | 11 | 700 | 0.576 |
0.7505 |
| AF-Q45409-F1-model_v4 | 2 | 400 | 13 | 717 | 0.5708 |
0.7523 |
| AF-Q8X7L9-F1-model_v4 | 2 | 400 | 12 | 701 | 0.5682 |
0.7402 |