PROTEIN: RavehSadkaT_2016_SRR6257474_bin.5_k119_1354_27
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Protein File & Metadata
Source:
RavehSadkaT_2016_SRR6257474_bin.5_k119_1354_27.pdb
Genome ID:
Protein ID:
RavehSadkaT_2016_SRR6257474_bin.5_k119_1354_27
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Protein Sequence
MARTYAYSAD FDKDIENLFK EAKLLGEGHN GIVYEVPGNR AIKIFTDKNV CKSEAEILYR 60 VKKSKYFPRI YKSGDYYILR DMVNGIRLDD YIKENGLSHQ LIYNLYRLIN EFKSLKFTKL 120 DARCRDIYVN KNERLMVIDP KQCYRRKVDY PRHLMKGLDG IDVLEEFLRG IYIIDKRRGS 180 EWEHKINQYY AKEY 194
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-B5WWL2-F1-model_v4 | 10 | 194 | 19 | 243 | 0.6781 |
0.816 |
| AF-Q54W07-F1-model_v4 | 9 | 194 | 29 | 250 | 0.6448 |
0.7821 |
| AF-U7PIN8-F1-model_v4 | 20 | 186 | 1 | 225 | 0.581 |
0.7924 |
| AF-X8F8F2-F1-model_v4 | 6 | 181 | 20 | 243 | 0.5738 |
0.7429 |
| AF-J9F605-F1-model_v4 | 6 | 188 | 1 | 285 | 0.5621 |
0.7463 |
| AF-A0A3P7EIN5-F1-model_v4 | 12 | 189 | 46 | 230 | 0.5478 |
0.6729 |
| AF-A0A0J9XX08-F1-model_v4 | 4 | 188 | 21 | 305 | 0.546 |
0.7423 |
| AF-Q8C0N0-F1-model_v4 | 4 | 193 | 15 | 431 | 0.5114 |
0.7611 |
| AF-C0HKC9-F1-model_v4 | 8 | 191 | 18 | 403 | 0.5079 |
0.7803 |
| AF-A0A087WSF2-F1-model_v4 | 11 | 189 | 20 | 260 | 0.5028 |
0.7921 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A0N9I9J3-F1-model_v4 | CBM2 | 6 | 189 | 1 | 245 | 0.5026 |
0.7381 |
| AF-W5W9C4-F1-model_v4 | CBM2 | 5 | 189 | 5 | 258 | 0.4988 |
0.7415 |
| A0A9R0U8K3 | CBM2 | 4 | 186 | 8 | 265 | 0.4938 |
0.7443 |
| AF-A0A0H3D2W5-F1-model_v4 | CBM2 | 6 | 186 | 10 | 265 | 0.4912 |
0.7481 |
| AF-A0A0H3D436-F1-model_v4 | CBM2 | 9 | 189 | 6 | 249 | 0.4849 |
0.7363 |
| AF-A0A290Z8U2-F1-model_v4 | CBM2 | 6 | 189 | 1 | 250 | 0.4831 |
0.7368 |
| AF-A0A7H8HAJ3-F1-model_v4 | CBM2 | 9 | 189 | 6 | 249 | 0.4816 |
0.7294 |
| UQU65731.1 | CBM13 | 6 | 189 | 7 | 249 | 0.4757 |
0.7427 |
| A0A9R0NW47 | CBM2 | 9 | 189 | 74 | 317 | 0.4702 |
0.7412 |
| AF-A0A1S6HCY2-F1-model_v4 | GH88 | 3 | 189 | 10 | 207 | 0.4551 |
0.7331 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9R0U8K3 | CBM2 | 4 | 186 | 8 | 265 | 0.4938 |
0.7443 |
| A0A5Q0H4U0 | CBM2 | 10 | 189 | 7 | 248 | 0.4814 |
0.7384 |
| C6WHB0 | CBM2 | 6 | 181 | 1 | 280 | 0.4809 |
0.7638 |
| UQU65731.1 | CBM13 | 6 | 189 | 7 | 249 | 0.4757 |
0.7427 |
| A0A9R0NW47 | CBM2 | 9 | 189 | 74 | 317 | 0.4702 |
0.7412 |
| WDE98161.1 | CBM35 | 10 | 189 | 29 | 284 | 0.4556 |
0.7918 |
| A0A0B5HRL7 | GH88 | 4 | 186 | 10 | 207 | 0.4539 |
0.7443 |
| QYX78624.1 | GH114 | 6 | 194 | 6 | 587 | 0.4512 |
0.7149 |
| WDZ83731.1 | CBM32 | 7 | 189 | 52 | 298 | 0.4476 |
0.7354 |
| D7B6T4 | CBM5 | 2 | 194 | 12 | 351 | 0.4467 |
0.6969 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4d2s-assembly1.cif.gz_A | 9 | 187 | 6 | 232 | 0.5964 |
0.7439 |
| 6tnb-assembly1.cif.gz_A | 9 | 187 | 2 | 234 | 0.5957 |
0.7475 |
| 2x9e-assembly1.cif.gz_A-2 | 9 | 187 | 4 | 235 | 0.593 |
0.7443 |
| 5teh-assembly2.cif.gz_B | 12 | 189 | 6 | 231 | 0.5817 |
0.7446 |
| 5ap1-assembly1.cif.gz_A | 9 | 188 | 4 | 254 | 0.5803 |
0.7445 |
| 4ybk-assembly1.cif.gz_A | 10 | 189 | 6 | 235 | 0.5735 |
0.7312 |
| 7dxl-assembly2.cif.gz_B | 11 | 189 | 7 | 233 | 0.5644 |
0.7134 |
| 6iup-assembly1.cif.gz_A | 8 | 185 | 1 | 266 | 0.564 |
0.7456 |
| 3vs5-assembly2.cif.gz_B | 12 | 189 | 171 | 399 | 0.4964 |
0.7495 |
| 3vs7-assembly1.cif.gz_A | 12 | 189 | 177 | 404 | 0.4945 |
0.7493 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q4HYC1-F1-model_v4 | 4 | 194 | 18 | 260 | 0.6829 |
0.8184 |
| AF-O32057-F1-model_v4 | 11 | 193 | 1 | 205 | 0.6517 |
0.7456 |
| AF-Q54W07-F1-model_v4 | 9 | 194 | 29 | 250 | 0.6448 |
0.7821 |
| AF-O01427-F1-model_v4 | 11 | 186 | 22 | 264 | 0.572 |
0.78 |
| AF-Q8C0N0-F1-model_v4 | 4 | 193 | 15 | 431 | 0.5114 |
0.7611 |
| AF-C0HKC9-F1-model_v4 | 8 | 191 | 18 | 403 | 0.5079 |
0.7803 |
| AF-O27476-F1-model_v4 | 1 | 194 | 269 | 533 | 0.4865 |
0.7261 |
| AF-Q54SC4-F1-model_v4 | 1 | 180 | 271 | 565 | 0.4688 |
0.7786 |
| AF-Q55CA6-F1-model_v4 | 13 | 194 | 71 | 459 | 0.4596 |
0.755 |
| AF-P9WI64-F1-model_v4 | 1 | 189 | 7 | 267 | 0.4153 |
0.7391 |