PROTEIN: RavehSadkaT_2016_SRR6257474_bin.5_k119_1214_33
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Protein File & Metadata
Source:
RavehSadkaT_2016_SRR6257474_bin.5_k119_1214_33.pdb
Genome ID:
Protein ID:
RavehSadkaT_2016_SRR6257474_bin.5_k119_1214_33
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Protein Sequence
MNYLSDLHTH TIVSGHAYTT LMENIDYCAK NGIKILGTSE HAPSMPGAPH YWYFGNLKVL 60 PRIINDVIIL RGCEGNILDI DGNIDLPEDA MKYLDYMIAS FHEPVFKPKT KEENTIAILN 120 VMDKYEKVEI LGHLGNPNYA LDYDAIIKKA KEKNIMVEIN NSSLSGSSRV GSDVNCEKIA 180 LLCKEYGAKV ILTSDAHINS KIGDFTKGIE LFEKIDMPEE LIMNEPDKLI GHLKSKGRLM 240 DLEY 244
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7CQR9-F1-model_v4 | 1 | 244 | 1 | 243 | 0.9507 |
0.9677 |
| AF-A0A0H3GRB9-F1-model_v4 | 1 | 244 | 1 | 243 | 0.9506 |
0.9676 |
| AF-Q32HN6-F1-model_v4 | 1 | 244 | 1 | 243 | 0.9504 |
0.9674 |
| AF-P75914-F1-model_v4 | 1 | 244 | 1 | 244 | 0.9496 |
0.9629 |
| AF-X8FN83-F1-model_v4 | 1 | 238 | 70 | 310 | 0.7576 |
0.8821 |
| AF-Q58691-F1-model_v4 | 2 | 238 | 1 | 218 | 0.7504 |
0.8178 |
| AF-P96221-F1-model_v4 | 1 | 238 | 94 | 334 | 0.7364 |
0.8839 |
| AF-K0F3X6-F1-model_v4 | 1 | 238 | 110 | 350 | 0.7202 |
0.8828 |
| AF-Q2FZD4-F1-model_v4 | 1 | 238 | 330 | 567 | 0.6061 |
0.8765 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1m65-assembly1.cif.gz_A | 3 | 244 | 1 | 232 | 0.9296 |
0.9679 |
| 1pb0-assembly1.cif.gz_C | 1 | 244 | 1 | 233 | 0.9241 |
0.9613 |
| 1pb0-assembly1.cif.gz_A | 1 | 244 | 1 | 234 | 0.923 |
0.9586 |
| 2yxo-assembly1.cif.gz_B | 4 | 236 | 1 | 259 | 0.723 |
0.8104 |
| 4gyf-assembly1.cif.gz_A | 1 | 244 | 1 | 263 | 0.7079 |
0.7627 |
| 2w9m-assembly1.cif.gz_A | 1 | 238 | 302 | 538 | 0.608 |
0.8693 |
| 3au6-assembly1.cif.gz_A | 1 | 238 | 328 | 562 | 0.6071 |
0.8851 |
| 3b0y-assembly1.cif.gz_A | 1 | 237 | 335 | 573 | 0.6047 |
0.8805 |
| 3b0x-assembly1.cif.gz_A | 1 | 237 | 335 | 573 | 0.6044 |
0.8801 |
| 3au2-assembly1.cif.gz_A | 1 | 237 | 335 | 573 | 0.6044 |
0.8801 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q97LP5-F1-model_v4 | 1 | 244 | 1 | 243 | 0.9715 |
0.9838 |
| AF-A0PYB3-F1-model_v4 | 1 | 244 | 1 | 243 | 0.9701 |
0.9827 |
| AF-A7FYX3-F1-model_v4 | 1 | 244 | 1 | 242 | 0.9701 |
0.9843 |
| AF-A7GIX5-F1-model_v4 | 1 | 244 | 1 | 242 | 0.9699 |
0.9841 |
| AF-A5I7A4-F1-model_v4 | 1 | 244 | 1 | 242 | 0.9695 |
0.9838 |
| AF-B1IFW5-F1-model_v4 | 1 | 244 | 1 | 242 | 0.9693 |
0.9837 |
| AF-Q44408-F1-model_v4 | 1 | 243 | 1 | 240 | 0.9626 |
0.9798 |
| AF-A4XIQ6-F1-model_v4 | 1 | 242 | 1 | 239 | 0.9624 |
0.9812 |
| AF-Q87IV1-F1-model_v4 | 1 | 244 | 1 | 246 | 0.9595 |
0.977 |
| AF-Q5E1G0-F1-model_v4 | 1 | 244 | 1 | 248 | 0.9582 |
0.976 |