PROTEIN: RavehSadkaT_2015_SRR1779126_bin.1_k141_9042_2
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Protein File & Metadata
Source:
RavehSadkaT_2015_SRR1779126_bin.1_k141_9042_2.pdb
Genome ID:
Protein ID:
RavehSadkaT_2015_SRR1779126_bin.1_k141_9042_2
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Protein Sequence
MGKRLISANA SEILQMTAAE LKQSIKASEG RTILSENVAP RESFIGDITN SEIARAFGAD 60 LILLNCVDVL NPCIFGLEVK EGSSFVDELH NLVGRPIGVN LEPVDLEADM AEDLYTISKG 120 RQANLETIKE IERLGMDFVC FTGNPGTGVT NSQIEKTIRL AKENFSGLII AGKMHGAGVN 180 EPVADLKAVE SFIDAGADII LVPAVGTVPG FDDSELKEVV RVAHEKGALV LTAIGTSQES 240 ADEDTIKQIA IRNKICGVDI QHIGDAGYGG VAPFENIFAM SKAIRGVRHT VSMIARSINR 300
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A132P1I0-F1-model_v4 | 1 | 300 | 1 | 308 | 0.9542 |
0.9747 |
| AF-A0A1C1CVS0-F1-model_v4 | 28 | 285 | 1 | 223 | 0.6734 |
0.7893 |
| AF-A0A0D2GG89-F1-model_v4 | 28 | 285 | 1 | 221 | 0.6733 |
0.792 |
| AF-P9WG73-F1-model_v4 | 3 | 289 | 3 | 232 | 0.6528 |
0.7913 |
| AF-K0F8B5-F1-model_v4 | 3 | 286 | 5 | 231 | 0.6505 |
0.8009 |
| AF-Q9L9J1-F1-model_v4 | 4 | 289 | 1 | 229 | 0.6475 |
0.7937 |
| AF-Q32EA9-F1-model_v4 | 11 | 296 | 1 | 284 | 0.6448 |
0.6841 |
| AF-Q9ZBL2-F1-model_v4 | 3 | 289 | 3 | 232 | 0.6429 |
0.7924 |
| AF-Q9I5G5-F1-model_v4 | 26 | 286 | 2 | 243 | 0.6425 |
0.7388 |
| AF-A0A2R8QH61-F1-model_v4 | 4 | 289 | 1 | 252 | 0.6409 |
0.7143 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-U5QCX7-F1-model_v4 | GH39 | 27 | 289 | 22 | 306 | 0.604 |
0.7129 |
| AF-A0A2Z5JWC5-F1-model_v4 | GH5_8 | 15 | 300 | 36 | 340 | 0.6019 |
0.6999 |
| AF-A0A7I7U2L1-F1-model_v4 | GH39 | 27 | 292 | 26 | 353 | 0.6002 |
0.7437 |
| AF-D0PR23-F1-model_v4 | GH26 | 15 | 296 | 37 | 374 | 0.5966 |
0.723 |
| AF-A0A1B1G366-F1-model_v4 | GH26 | 15 | 296 | 37 | 374 | 0.5966 |
0.723 |
| A0A3Q9FR09 | GH26 | 15 | 296 | 37 | 374 | 0.5958 |
0.7219 |
| AF-A0A3Q9FR09-F1-model_v4 | GH26 | 15 | 296 | 37 | 374 | 0.5958 |
0.7219 |
| AF-A0A7T1GX77-F1-model_v4 | GH18 | 27 | 285 | 1 | 305 | 0.5939 |
0.7091 |
| AF-A0A140SSW3-F1-model_v4 | GH18 | 27 | 285 | 1 | 304 | 0.5938 |
0.7078 |
| AF-A0A3T1CKS4-F1-model_v4 | GH113 | 14 | 285 | 24 | 336 | 0.5897 |
0.7012 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| F8L3S1 | GH18 | 1 | 288 | 1 | 272 | 0.6472 |
0.705 |
| B6IQV0 | GH18 | 24 | 288 | 12 | 292 | 0.6055 |
0.698 |
| A0A0D5ADU3 | GH39 | 6 | 283 | 29 | 344 | 0.5981 |
0.7047 |
| A0A3Q9FR09 | GH26 | 15 | 296 | 37 | 374 | 0.5958 |
0.7219 |
| A0A1C3SZV1 | GH39 | 7 | 286 | 26 | 341 | 0.5909 |
0.6913 |
| A0A3T1CKS4 | GH113 | 14 | 285 | 24 | 336 | 0.5897 |
0.7012 |
| B2PYU4 | GH18 | 26 | 285 | 11 | 316 | 0.5873 |
0.7092 |
| A0A1Z4PZ02 | GH39 | 23 | 286 | 38 | 327 | 0.5872 |
0.7093 |
| A0A7S8IET5 | GH39 | 22 | 300 | 42 | 405 | 0.585 |
0.733 |
| A0A126V415 | GH113 | 11 | 289 | 22 | 335 | 0.5838 |
0.6784 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1g4p-assembly2.cif.gz_B | 14 | 289 | 1 | 217 | 0.6644 |
0.7919 |
| 3o16-assembly1.cif.gz_A | 17 | 289 | 1 | 208 | 0.6603 |
0.7979 |
| 5z9y-assembly2.cif.gz_B | 4 | 286 | 1 | 216 | 0.6559 |
0.8113 |
| 1xm3-assembly1.cif.gz_C | 3 | 289 | 1 | 231 | 0.6552 |
0.7864 |
| 1g67-assembly1.cif.gz_A | 14 | 289 | 1 | 223 | 0.6536 |
0.7726 |
| 4n6e-assembly1.cif.gz_A | 3 | 286 | 1 | 229 | 0.6524 |
0.783 |
| 6rg0-assembly4.cif.gz_D | 6 | 286 | 1 | 217 | 0.6516 |
0.7786 |
| 2rkx-assembly1.cif.gz_A | 26 | 293 | 1 | 250 | 0.6474 |
0.7251 |
| 1lt7-assembly1.cif.gz_B | 13 | 294 | 1 | 277 | 0.6465 |
0.7331 |
| 3iio-assembly6.cif.gz_F | 28 | 293 | 1 | 248 | 0.6455 |
0.7255 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0KWK2-F1-model_v4 | 4 | 289 | 1 | 229 | 0.6518 |
0.793 |
| AF-A7Z3F8-F1-model_v4 | 4 | 289 | 1 | 230 | 0.6471 |
0.7869 |
| AF-Q9A229-F1-model_v4 | 26 | 297 | 1 | 259 | 0.6471 |
0.7153 |
| AF-Q65L94-F1-model_v4 | 4 | 289 | 1 | 230 | 0.6469 |
0.7875 |
| AF-Q8CN30-F1-model_v4 | 4 | 286 | 1 | 227 | 0.6464 |
0.7969 |
| AF-A8FC15-F1-model_v4 | 4 | 289 | 1 | 230 | 0.6458 |
0.7864 |
| AF-Q5L2C0-F1-model_v4 | 3 | 289 | 2 | 232 | 0.6458 |
0.786 |
| AF-B7HWF4-F1-model_v4 | 4 | 289 | 1 | 230 | 0.6452 |
0.7873 |
| AF-Q32EA9-F1-model_v4 | 11 | 296 | 1 | 284 | 0.6448 |
0.6841 |
| AF-Q73DB1-F1-model_v4 | 4 | 289 | 1 | 230 | 0.6444 |
0.7867 |