PROTEIN: NQ544_RS13905
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Protein File & Metadata
Source:
NQ544_RS13905.pdb
Genome ID:
Protein ID:
NQ544_RS13905
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Protein Sequence
MFCLCVFLFG HTSADAQNRN LPADINPYFG PVGKQPVMPN AAGFIQRWLL LEPISMPVKS 60 NVVFTDSYLK EIFHTQYFPK QMETVPKDGA VVKVGKEKLK WHALDSKLFN VKLFRFATSF 120 KKPKYGVLFW AVTILDCPEE MKDVRLSVGS NGASMWWLNG EEAVMLEGDR RMVRDDVVSK 180 KLTLKKGRNI LRGAVINGPG MSDFCVRFID GQGKPVRNLS VLVK 224
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q766D5-F1-model_v4 | 34 | 224 | 117 | 282 | 0.325 |
0.7068 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 23 | 224 | 379 | 701 | 0.582 |
0.9834 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 22 | 224 | 382 | 700 | 0.5792 |
0.9728 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 22 | 224 | 482 | 697 | 0.5711 |
0.958 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 22 | 224 | 843 | 1048 | 0.5242 |
0.9579 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 17 | 224 | 19 | 214 | 0.4756 |
0.8423 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 3 | 224 | 52 | 277 | 0.462 |
0.7974 |
| A0A380YJ87 | GH20 | 1 | 224 | 88 | 837 | 0.4521 |
0.7217 |
| AF-A0A415S3H1-F1-model_v4 | GH20 | 1 | 224 | 88 | 837 | 0.451 |
0.7194 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 17 | 214 | 17 | 202 | 0.4371 |
0.8303 |
| AF-A0A172TWX5-F1-model_v4 | GH20 | 1 | 224 | 112 | 843 | 0.4353 |
0.6981 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 23 | 224 | 379 | 701 | 0.582 |
0.9834 |
| D7SFH3 | GH43_2 | 22 | 224 | 482 | 697 | 0.5711 |
0.958 |
| A0A7G9XVI1 | GH43_2 , GH8 | 22 | 224 | 843 | 1048 | 0.5242 |
0.9579 |
| A0A380YJ87 | GH20 | 1 | 224 | 88 | 837 | 0.4521 |
0.7217 |
| A0A344TID5 | GH163 | 17 | 214 | 17 | 202 | 0.4371 |
0.8303 |
| A0A402CZV5 | GH4 | 39 | 213 | 458 | 622 | 0.4347 |
0.8597 |
| A0A517YSN2 | GH31 | 8 | 224 | 572 | 1049 | 0.4147 |
0.7312 |
| A0A1H1SHM5 | GH2 | 7 | 224 | 733 | 1131 | 0.4139 |
0.7189 |
| BCM93550.1 | GH2 | 32 | 224 | 948 | 1134 | 0.4113 |
0.8236 |
| A0A1U9NQX6 | CBM51 , GH20 | 14 | 224 | 36 | 853 | 0.4112 |
0.6967 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q766D5-F1-model_v4 | 34 | 224 | 117 | 282 | 0.325 |
0.7068 |