PROTEIN: PATL_RS11945
Loading protein structure...
Loading protein structure...
Protein File & Metadata
Source:
PATL_RS11945.pdb
Genome ID:
Protein ID:
PATL_RS11945
Loading protein structure information...
Detailed structural information will appear here after analysis...
Protein Sequence
MKKLLLILAL CFSLPSQANL LTLDVSSPEL NIGEALSVTV SATNFDPFST LGFEIEFDTD 60 LFAFAPNSVG GDLANTGAFI FEVSAQTYGV AMSFIDFEDF TQPNFSAFTF NLTAIASGST 120 DFTLANIQSF MPIDSAALNA SAQVNSVPAA GTFSIFLFTA FCLALRHRTR ARLTS 175
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-D9SV33-F1-model_v4 | CBM3 | 11 | 148 | 209 | 429 | 0.4635 |
0.8296 |
| AF-A0A173N042-F1-model_v4 | CBM3 | 10 | 148 | 209 | 429 | 0.4624 |
0.8223 |
| A0A9E7TKR7 | GH18 | 1 | 155 | 217 | 540 | 0.4429 |
0.7593 |
| AF-O82830-F1-model_v4 | CBM3 | 1 | 170 | 438 | 852 | 0.4313 |
0.7894 |
| AF-A0A7D5GT78-F1-model_v4 | CBM5 | 7 | 147 | 255 | 421 | 0.4055 |
0.7906 |
| ACT00657.1 | GH3 | 5 | 160 | 486 | 858 | 0.405 |
0.762 |
| AF-A0A6B8RDC9-F1-model_v4 | CBM66 , GH141 | 12 | 175 | 992 | 1211 | 0.4038 |
0.7711 |
| AF-A0A6C0P814-F1-model_v4 | CBM9 , GH30 | 14 | 157 | 898 | 1055 | 0.3972 |
0.8339 |
| AF-Q8XNR6-F1-model_v4 | GH3 | 1 | 153 | 184 | 783 | 0.3898 |
0.7426 |
| AF-A0A7S7EPK5-F1-model_v4 | GH10 | 1 | 146 | 538 | 692 | 0.3894 |
0.786 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A9E7TKR7 | GH18 | 1 | 155 | 217 | 540 | 0.4429 |
0.7593 |
| A0A7D5GT78 | CBM5 | 7 | 147 | 255 | 421 | 0.4055 |
0.7906 |
| ACT00657.1 | GH3 | 5 | 160 | 486 | 858 | 0.405 |
0.762 |
| A0A127EEV6 | GH3 | 1 | 154 | 183 | 784 | 0.3989 |
0.7558 |
| A0A6C0P814 | CBM9 , GH30 | 14 | 157 | 898 | 1055 | 0.3972 |
0.8339 |
| I3VRN8 | CBM61 , GH53 | 1 | 157 | 682 | 922 | 0.3907 |
0.7814 |
| A0A7S7EPK5 | GH10 | 1 | 146 | 538 | 692 | 0.3894 |
0.786 |
| P38058 | CBM3 | 6 | 158 | 636 | 895 | 0.3837 |
0.8137 |
| UJF31414.1 | GH43_27 | 14 | 172 | 1027 | 1245 | 0.3739 |
0.7366 |
| A0A345UIM0 | CBM48 | 11 | 156 | 19 | 261 | 0.3638 |
0.7751 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1g1k-assembly2.cif.gz_B | 17 | 147 | 1 | 143 | 0.6819 |
0.8411 |
| 6kge-assembly2.cif.gz_A | 18 | 145 | 1 | 141 | 0.6747 |
0.8429 |
| 2xdh-assembly1.cif.gz_A | 17 | 146 | 1 | 128 | 0.6718 |
0.8292 |
| 2vn6-assembly1.cif.gz_A | 11 | 146 | 4 | 151 | 0.6671 |
0.815 |
| 5nrm-assembly1.cif.gz_A | 17 | 144 | 1 | 141 | 0.6605 |
0.8275 |
| 1ohz-assembly1.cif.gz_A | 18 | 144 | 1 | 139 | 0.6591 |
0.8283 |
| 6kg8-assembly1.cif.gz_A | 16 | 149 | 7 | 154 | 0.6587 |
0.8269 |
| 4ums-assembly1.cif.gz_A | 16 | 148 | 1 | 148 | 0.6472 |
0.8152 |
| 4dh2-assembly2.cif.gz_C | 16 | 147 | 7 | 156 | 0.6414 |
0.8198 |
| 5m0y-assembly1.cif.gz_A | 15 | 146 | 1 | 170 | 0.6278 |
0.8411 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O28330-F1-model_v4 | 1 | 174 | 7 | 155 | 0.6456 |
0.7671 |
| AF-Q06853-F1-model_v4 | 3 | 175 | 19 | 325 | 0.4693 |
0.7697 |
| AF-Q06848-F1-model_v4 | 7 | 148 | 24 | 176 | 0.4561 |
0.8028 |
| AF-O29350-F1-model_v4 | 1 | 153 | 228 | 481 | 0.4055 |
0.7054 |
| AF-Q06852-F1-model_v4 | 14 | 170 | 198 | 386 | 0.362 |
0.7649 |
| AF-Q06851-F1-model_v4 | 15 | 146 | 558 | 704 | 0.3427 |
0.8308 |