PROTEIN: PATL_RS11785
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Protein File & Metadata
Source:
PATL_RS11785.pdb
Genome ID:
Protein ID:
PATL_RS11785
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Protein Sequence
MNKTKQLFTH ISSQGELNIT LKEVDVPKPK AHEIVVQMHA APINPSDMWP MFGPADLSKA 60 TLSDDKTTYS APVHPGMLPR IKSRLDQTLP IGNEGAGVVV AAGDSEKAQS LLGKTVAVLT 120 GACYTQYCCV PIQACIVHHD DTTPLAAASS FVNPLTALGM VETMRMEGHK ALVHTAAASS 180 LGIMLNKICL KEGVQLVNIV RKQEQVDLLT KLGAKYVVNS TSETFKKDLY KAIEATGATL 240 AFDAIGGGEL ASDILAAMEA VGSKDATGFN TYGSLDNKQV YIYGGLDFSP TTLNRAFGMT 300 WSVGGWLLMR FLGKLDATKV AELHQRVADE INTTFAIESS VELSFEEALD PQTVVKYFAK 360 STGGKYILNP NKG 373
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-K0EUX2-F1-model_v4 | 3 | 372 | 1 | 327 | 0.8195 |
0.8889 |
| AF-A0A0H3GZ29-F1-model_v4 | 3 | 371 | 1 | 330 | 0.7843 |
0.851 |
| AF-A0A0H3GWM3-F1-model_v4 | 1 | 373 | 10 | 327 | 0.7814 |
0.872 |
| AF-Q9XXC8-F1-model_v4 | 1 | 373 | 4 | 342 | 0.7798 |
0.8429 |
| AF-P28304-F1-model_v4 | 3 | 370 | 1 | 327 | 0.7793 |
0.8484 |
| AF-Q8MNM6-F1-model_v4 | 1 | 372 | 3 | 339 | 0.776 |
0.8366 |
| AF-P40783-F1-model_v4 | 3 | 370 | 1 | 327 | 0.776 |
0.8453 |
| AF-O45496-F1-model_v4 | 1 | 372 | 7 | 328 | 0.7749 |
0.8582 |
| AF-A0A0H3GHI8-F1-model_v4 | 3 | 370 | 1 | 327 | 0.7743 |
0.8429 |
| AF-A0A132Z012-F1-model_v4 | 4 | 373 | 1 | 315 | 0.7738 |
0.8567 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A6L9JGG6 | GH16 | 4 | 371 | 1 | 342 | 0.7211 |
0.7729 |
| M5EEC9 | GH43_26 | 1 | 373 | 311 | 638 | 0.598 |
0.8592 |
| AF-C0P622-F1-model_v4 | GH28 | 1 | 373 | 163 | 506 | 0.5914 |
0.7446 |
| A0A8D6ZK64 | GH28 | 1 | 372 | 191 | 531 | 0.579 |
0.7492 |
| AF-A0A1W6CNQ8-F1-model_v4 | GT2 | 1 | 372 | 307 | 646 | 0.5608 |
0.781 |
| AF-W6KP48-F1-model_v4 | GT2 | 1 | 373 | 303 | 639 | 0.5605 |
0.7852 |
| AF-A0A094F1U7-F1-model_v4 | GH135 | 2 | 373 | 1 | 375 | 0.5554 |
0.7164 |
| QWU87001.1 | GT22 | 1 | 372 | 479 | 824 | 0.5278 |
0.783 |
| AF-A0A3P6GME2-F1-model_v4 | GH28 | 1 | 371 | 400 | 750 | 0.5163 |
0.7336 |
| A0A9Q8Z892 | CBM91 , GH43_13 | 1 | 373 | 12 | 366 | 0.5152 |
0.7709 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| J1KX27 | GT4 | 4 | 371 | 1 | 337 | 0.7369 |
0.7959 |
| A0A6L9JGG6 | GH16 | 4 | 371 | 1 | 342 | 0.7211 |
0.7729 |
| A0A9Q7AYV1 | AA10 | 4 | 371 | 1 | 347 | 0.6745 |
0.7216 |
| A0A7H8QGD1 | GH76 | 1 | 373 | 3 | 358 | 0.6321 |
0.7397 |
| M5EEC9 | GH43_26 | 1 | 373 | 311 | 638 | 0.598 |
0.8592 |
| A0A8D6ZK64 | GH28 | 1 | 372 | 191 | 531 | 0.579 |
0.7492 |
| A0A1W6CNQ8 | GT2 | 1 | 372 | 307 | 646 | 0.5608 |
0.781 |
| A0A094F1U7 | GH135 | 2 | 373 | 1 | 375 | 0.5554 |
0.7164 |
| QWU87001.1 | GT22 | 1 | 372 | 479 | 824 | 0.5278 |
0.783 |
| A0A3P6GME2 | GH28 | 1 | 371 | 400 | 750 | 0.5163 |
0.7336 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3iup-assembly1.cif.gz_B | 2 | 373 | 1 | 374 | 0.9716 |
0.9835 |
| 3gms-assembly1.cif.gz_A | 1 | 372 | 1 | 331 | 0.8079 |
0.8726 |
| 3pi7-assembly1.cif.gz_A-2 | 1 | 370 | 4 | 344 | 0.7749 |
0.8317 |
| 3jyl-assembly1.cif.gz_A | 3 | 370 | 1 | 325 | 0.7708 |
0.8427 |
| 7ayc-assembly1.cif.gz_A-2 | 5 | 373 | 1 | 338 | 0.7705 |
0.8276 |
| 8j6e-assembly1.cif.gz_A | 3 | 372 | 2 | 335 | 0.7699 |
0.8318 |
| 1qor-assembly1.cif.gz_B | 4 | 370 | 1 | 326 | 0.7697 |
0.8403 |
| 1zsy-assembly1.cif.gz_A | 1 | 371 | 14 | 347 | 0.7684 |
0.8441 |
| 5dp1-assembly1.cif.gz_A | 1 | 371 | 1 | 332 | 0.767 |
0.8314 |
| 1iyz-assembly1.cif.gz_A-2 | 4 | 371 | 1 | 299 | 0.7658 |
0.8674 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9XXC8-F1-model_v4 | 1 | 373 | 4 | 342 | 0.7798 |
0.8429 |
| AF-P28304-F1-model_v4 | 3 | 370 | 1 | 327 | 0.7793 |
0.8484 |
| AF-P40783-F1-model_v4 | 3 | 370 | 1 | 327 | 0.776 |
0.8453 |
| AF-Q28GQ2-F1-model_v4 | 1 | 370 | 14 | 350 | 0.7734 |
0.845 |
| AF-P43903-F1-model_v4 | 3 | 370 | 1 | 325 | 0.7714 |
0.8436 |
| AF-Q9V6U9-F1-model_v4 | 1 | 372 | 20 | 357 | 0.7696 |
0.8465 |
| AF-Q59I44-F1-model_v4 | 3 | 372 | 1 | 333 | 0.7693 |
0.832 |
| AF-O74489-F1-model_v4 | 1 | 373 | 1 | 325 | 0.7683 |
0.8458 |
| AF-Q6AYT0-F1-model_v4 | 1 | 370 | 5 | 329 | 0.7658 |
0.8436 |
| AF-Q28452-F1-model_v4 | 1 | 372 | 5 | 330 | 0.7647 |
0.8414 |