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PROTEIN: PATL_RS04170

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Protein File & Metadata
Download PDB File
Source:
PATL_RS04170.pdb
Genome ID:
PUL0706
Protein ID:
PATL_RS04170

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Detailed structural information will appear here after analysis...

Protein Sequence 
MQNTKLNTTE   TASSHSALDS   ACHSALDAPK   VDTSKRQFLQ   GGATLGSALL   LAGMSSSTHA 60
HEPEKKQLPK   AGRSPHGSIV   GHGDFQYKVD   YNWGRLDPHK   VPVENSHGLA   IDSKGRIIMV 120
TDSDVNNFVV   YNKDGKLLDA   WGTQYPGAHS   VKISHENGED   FIYIVDCGWV   LDRNRPDDQW 180
KNKWYPQSGF   IAKLTIDGKL   VYTIGHPVTI   GIYTPDMRYQ   PTDLTVAPNG   DLYVTDGYGS 240
DFVIHYDSNG   KYLRHWGGTK   NADKSLNLVN   THGIGVDTRD   PNNHHLLVSS   RGEQAIKKYS 300
MDGKLLGDIH   LPGAYVGGPV   FKGEHFYAPV   CWSHIDAKMA   PNSGFITILD   KNNRVVSNPG 360
GLAPEYVNAQ   LQPMQTNYQV   FNHCHAVCVD   DDENLYVGQW   NANQMYPIKL   ERV 413
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-I6X7J6-F1-model_v4 56 413 23 343 0.6035 0.7122
AF-K7M3S7-F1-model_v4 62 413 32 421 0.5234 0.6389
AF-A0A0R0I3N7-F1-model_v4 10 413 33 456 0.4943 0.5536
AF-Q10LQ8-F1-model_v4 21 413 48 451 0.4902 0.5596
AF-A0A0K0J2L9-F1-model_v4 78 413 149 672 0.4851 0.771
AF-P91272-F1-model_v4 61 413 125 601 0.4801 0.6769
AF-A0A1D6KXM9-F1-model_v4 42 413 16 461 0.48 0.5821
AF-A0A3P7EYI8-F1-model_v4 17 413 53 641 0.4733 0.6129
AF-A0A1U7F3V1-F1-model_v4 58 413 70 644 0.4598 0.658
AF-A0A044SN29-F1-model_v4 41 413 129 716 0.4469 0.6371
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A7I8DGQ0-F1-model_v4 GH93 63 413 27 418 0.5894 0.7081
AF-Q7F0N4-F1-model_v4 GH33 10 413 34 418 0.5727 0.6371
QNN83491.1 GH33 84 413 72 434 0.5597 0.7232
AF-A0A221W5Y2-F1-model_v4 GH33 40 413 24 442 0.5488 0.6456
A0A9Q8WQQ1 AA12 , AA8 60 413 24 590 0.5029 0.688
A0A9Q8L9M0 AA12 29 413 30 580 0.4842 0.6352
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A7I8DGQ0 GH93 63 413 27 418 0.5894 0.7081
K8EHP9 GH33 66 413 56 403 0.5743 0.707
QNN83491.1 GH33 84 413 72 434 0.5597 0.7232
A0A221W5Y2 GH33 40 413 24 442 0.5488 0.6456
A0A9Q8L9M0 AA12 29 413 30 580 0.4842 0.6352
J3NQW7 AA12 , AA8 8 413 21 726 0.4692 0.6128
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6xg7-assembly1.cif.gz_A 81 410 4 288 0.7111 0.8568
7qrv-assembly2.cif.gz_B 78 413 1 276 0.7082 0.8599
7nyq-assembly1.cif.gz_A 81 413 1 273 0.6962 0.8513
5ex7-assembly1.cif.gz_A 81 413 3 274 0.694 0.8523
4zlr-assembly1.cif.gz_A 81 413 3 273 0.6895 0.8561
1q7f-assembly1.cif.gz_A 81 413 2 273 0.6864 0.8512
3fw0-assembly1.cif.gz_A 81 413 5 321 0.6808 0.7957
2dg0-assembly1.cif.gz_A 77 413 3 310 0.6475 0.7714
2dso-assembly3.cif.gz_C 77 413 4 311 0.6455 0.7703
4q1u-assembly1.cif.gz_A 79 412 19 328 0.637 0.76
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q39190-F1-model_v4 42 413 28 457 0.4726 0.5708
AF-Q9V4M2-F1-model_v4 33 411 279 832 0.4607 0.6705
AF-Q60525-F1-model_v4 1 413 44 508 0.4605 0.5316
AF-E1BD59-F1-model_v4 9 413 280 728 0.4436 0.5809
AF-Q55FJ2-F1-model_v4 40 413 383 761 0.4308 0.6133
AF-Q9V410-F1-model_v4 13 413 85 552 0.4177 0.6053
AF-P49695-F1-model_v4 15 413 342 740 0.416 0.555
AF-O88466-F1-model_v4 2 413 203 1813 0.3248 0.5371
AF-Q9H2Y7-F1-model_v4 4 413 1 1808 0.3247 0.5394
Download Full SwissProt Results