PROTEIN: LZI70_RS17755
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Protein File & Metadata
Source:
LZI70_RS17755.pdb
Genome ID:
Protein ID:
LZI70_RS17755
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Protein Sequence
MKKTIIALSL TLFTSSTFAE MDHSKMDHGK MDHSSMMGMQ RTSSVGMPAN GAKPDKVIHV 60 VLNDDKTITF KKEVKIEPND VVQFVVMNAG NEPHEFSIGS KEELESHRKM MAAMAGMEHD 120 TKNSIVVEPK KARQFMWHFH GDNNVEFACN FKGHAEAGMT KSMKL 165
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I036-F1-model_v4 | 35 | 165 | 46 | 203 | 0.6085 |
0.8544 |
| AF-Q5F809-F1-model_v4 | 21 | 165 | 6 | 181 | 0.5331 |
0.6532 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A6C0GFK3-F1-model_v4 | CBM38 | 33 | 165 | 20 | 133 | 0.3131 |
0.7585 |
| AF-A0A3G3GP85-F1-model_v4 | CBM38 | 51 | 165 | 26 | 124 | 0.2956 |
0.8253 |
| AF-A0A6C0GBI2-F1-model_v4 | CBM38 | 50 | 165 | 34 | 133 | 0.2937 |
0.8071 |
| AF-A0A7G5GP22-F1-model_v4 | CBM38 | 49 | 165 | 37 | 137 | 0.2934 |
0.7962 |
| AF-A0A515A4K6-F1-model_v4 | CBM38 | 50 | 165 | 33 | 132 | 0.2931 |
0.8055 |
| AF-A0A2K8Z3U6-F1-model_v4 | CBM38 | 50 | 165 | 35 | 134 | 0.2927 |
0.8047 |
| AF-A0A6M5Y8J3-F1-model_v4 | CBM38 | 50 | 165 | 33 | 133 | 0.2916 |
0.7911 |
| AF-A0A7U3ZP63-F1-model_v4 | CBM38 | 50 | 165 | 29 | 129 | 0.2912 |
0.7885 |
| AF-A0A7L7L6S4-F1-model_v4 | CBM38 | 51 | 165 | 35 | 133 | 0.2892 |
0.8027 |
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 1ov8-assembly1.cif.gz_A | 42 | 165 | 6 | 137 | 0.6636 |
0.8268 |
| 6l9s-assembly1.cif.gz_A | 55 | 165 | 3 | 123 | 0.6501 |
0.8512 |
| 7puh-assembly2.cif.gz_F | 53 | 165 | 8 | 141 | 0.3952 |
0.7144 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P27197-F1-model_v4 | 12 | 165 | 52 | 233 | 0.543 |
0.6942 |
| AF-P07212-F1-model_v4 | 24 | 165 | 4 | 181 | 0.5304 |
0.6624 |
| AF-P07211-F1-model_v4 | 20 | 165 | 4 | 181 | 0.5277 |
0.6411 |
| AF-P57026-F1-model_v4 | 24 | 165 | 6 | 181 | 0.5277 |
0.6591 |
| AF-P57025-F1-model_v4 | 24 | 165 | 4 | 181 | 0.5272 |
0.6586 |