PROTEIN: Rep_461_c_15_34
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Protein File & Metadata
Source:
Rep_461_c_15_34.pdb
Genome ID:
Protein ID:
Rep_461_c_15_34
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Protein Sequence
MNIFHRKSLL AICLTVMMTL PGYAQKNEES PQLSDYFSPA TTGVMSPDSE GFIQRWLLLE 60 PIDKPNRSNT VFTDSYIREA FATEYFPGQF TVLPKDGDKV KVGKQKLTWH ALESKLFNVK 120 LFRFASGLKK QVYGVLFWAV TVIECPEDME NVRMSVGSNS ASMWWVNGEE AVILSGDRRM 180 VKDDCLSRRL TLKKGKNIVR GAIINGPGMS DFCVRFLDEN GAPVKNITIS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-D4A750-F1-model_v4 | 4 | 232 | 2 | 283 | 0.3409 |
0.5708 |
| AF-Q766D5-F1-model_v4 | 4 | 232 | 2 | 283 | 0.3388 |
0.5683 |
| AF-Q76KP1-F1-model_v4 | 41 | 232 | 115 | 282 | 0.3258 |
0.7211 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 17 | 232 | 345 | 701 | 0.588 |
0.9532 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 17 | 232 | 347 | 700 | 0.5844 |
0.9473 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 16 | 232 | 412 | 697 | 0.5827 |
0.9389 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 12 | 232 | 681 | 1048 | 0.5438 |
0.9401 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 40 | 232 | 21 | 214 | 0.463 |
0.8532 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 17 | 232 | 17 | 277 | 0.4395 |
0.7987 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 25 | 221 | 296 | 622 | 0.4279 |
0.7328 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 40 | 222 | 22 | 202 | 0.4236 |
0.8475 |
| AF-A0A518LMX6-F1-model_v4 | GH31 | 12 | 232 | 87 | 1147 | 0.4127 |
0.728 |
| A0A380YJ87 | GH20 | 39 | 232 | 396 | 837 | 0.4105 |
0.7671 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 17 | 232 | 345 | 701 | 0.588 |
0.9532 |
| D7SFH3 | GH43_2 | 16 | 232 | 412 | 697 | 0.5827 |
0.9389 |
| A0A7G9XVI1 | GH43_2 , GH8 | 12 | 232 | 681 | 1048 | 0.5438 |
0.9401 |
| A0A402CZV5 | GH4 | 25 | 221 | 296 | 622 | 0.4279 |
0.7328 |
| A0A344TID5 | GH163 | 40 | 222 | 22 | 202 | 0.4236 |
0.8475 |
| A0A518LMX6 | GH31 | 12 | 232 | 87 | 1147 | 0.4127 |
0.728 |
| A0A380YJ87 | GH20 | 39 | 232 | 396 | 837 | 0.4105 |
0.7671 |
| A0A518BU48 | GH31 | 11 | 232 | 44 | 1031 | 0.4003 |
0.7082 |
| BCM93550.1 | GH2 | 40 | 232 | 948 | 1134 | 0.3993 |
0.8203 |
| A0A1H1SHM5 | GH2 | 41 | 232 | 945 | 1132 | 0.3957 |
0.8066 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q766D5-F1-model_v4 | 4 | 232 | 2 | 283 | 0.3388 |
0.5683 |
| AF-Q76KP1-F1-model_v4 | 41 | 232 | 115 | 282 | 0.3258 |
0.7211 |