PROTEIN: C54_scaffold_3399_426
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Protein File & Metadata
Source:
C54_scaffold_3399_426.pdb
Genome ID:
Protein ID:
C54_scaffold_3399_426
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Protein Sequence
MNIFHRKSLL AACIAAMMGL HGYAQKNEAS PRLSDYFSPA TTNTMSPDSE GFIQRWLLLE 60 PIDKPNRSNT VFTDSYIREA FATEYFPNQF TVLPKDGDKV KVGKQKLTWH ALDSKLFNVK 120 LFRFASGLKK QVYGVLFWAV TVIECPEDME NIRMSIGSNS ASMWWLNGEE AVILSGDRRM 180 VKDDCLSRRL TLKKGKNIIR GAIINGPGMS DFCVRFLNEN GTPVNNITIS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 12 | 232 | 1 | 362 | 0.454 |
0.6029 |
| AF-D4A750-F1-model_v4 | 6 | 232 | 15 | 283 | 0.3359 |
0.5672 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 16 | 232 | 346 | 701 | 0.5896 |
0.952 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 14 | 232 | 410 | 697 | 0.5873 |
0.938 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 16 | 232 | 349 | 700 | 0.5851 |
0.9437 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 1 | 232 | 392 | 1048 | 0.5559 |
0.9163 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 40 | 232 | 21 | 214 | 0.4645 |
0.8562 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 16 | 232 | 16 | 277 | 0.4402 |
0.7967 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 24 | 221 | 296 | 622 | 0.4287 |
0.7301 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 40 | 221 | 22 | 201 | 0.4233 |
0.8525 |
| AF-A0A518BU48-F1-model_v4 | GH31 | 1 | 232 | 204 | 1031 | 0.4206 |
0.7157 |
| A0A380YJ87 | GH20 | 39 | 232 | 396 | 837 | 0.4102 |
0.7666 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 16 | 232 | 346 | 701 | 0.5896 |
0.952 |
| D7SFH3 | GH43_2 | 14 | 232 | 410 | 697 | 0.5873 |
0.938 |
| A0A7G9XVI1 | GH43_2 , GH8 | 1 | 232 | 392 | 1048 | 0.5559 |
0.9163 |
| A0A402CZV5 | GH4 | 24 | 221 | 296 | 622 | 0.4287 |
0.7301 |
| A0A344TID5 | GH163 | 40 | 221 | 22 | 201 | 0.4233 |
0.8525 |
| A0A518BU48 | GH31 | 1 | 232 | 204 | 1031 | 0.4206 |
0.7157 |
| A0A380YJ87 | GH20 | 39 | 232 | 396 | 837 | 0.4102 |
0.7666 |
| A0A518LMX6 | GH31 | 12 | 232 | 89 | 1147 | 0.4101 |
0.7233 |
| BCM93550.1 | GH2 | 40 | 232 | 948 | 1135 | 0.3994 |
0.8171 |
| A0A1U9NQX6 | CBM51 , GH20 | 17 | 232 | 506 | 853 | 0.3959 |
0.6724 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 12 | 232 | 1 | 362 | 0.454 |
0.6029 |
| AF-Q7Z9I1-F1-model_v4 | 42 | 232 | 395 | 591 | 0.3953 |
0.6869 |