PROTEIN: Rep_490_c_2_3600
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Protein File & Metadata
Source:
Rep_490_c_2_3600.pdb
Genome ID:
Protein ID:
Rep_490_c_2_3600
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Protein Sequence
MKNIILIVSL LLMGVTSRAD ILNSSDNKNV AEKFDPMLKA ALFQMKIIAD TSSILLSDID 60 YVEDLELKTS LWINNDVNRA KTTRHEITSL KGLEYFSSLR RLKLVGNRTD TLECIPDFSR 120 FKELRELEIT QVYLPKLDIS GCKNLTNLSC RSCDLNTIDL KKNIQLRTLD CTYNRLIELD 180 LSHNKQLRTV IVKSQRNKGL LSEGGRAGIL SKLILPDNRS NTEGISILEC SDNNLEKLDI 240 SRSPHLRKIN CSWNKLKALE TSHNQELREL NCEANYIGEL DFSANLKMEF LTCGLQGYEW 300 IRQEGNDYRL LKKLILPEQK ENVEGVSLRK LSIKEISEEA IPVFSDYPYL KELNCADNRL 360 KTIDLSANIY LEVLDCSSNA ISQLDLHSNV NLYSLNILNC TLQVLDLSQT KVKLIMCDFY 420 DRREKGVKNG YISGLYLKLI VPKGYHAETI NFRTPTLETA SFENGSIYNY LPPQYVRMVV 480 SGK 483
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q17692-F1-model_v4 | 33 | 446 | 4 | 319 | 0.6286 |
0.8098 |
| AF-G3V7I7-F1-model_v4 | 35 | 479 | 22 | 566 | 0.5542 |
0.6721 |
| AF-A0A2R8RWU7-F1-model_v4 | 1 | 467 | 21 | 549 | 0.5458 |
0.6201 |
| AF-A0A0K0ENM9-F1-model_v4 | 63 | 459 | 10 | 690 | 0.427 |
0.6529 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4fmz-assembly1.cif.gz_A | 24 | 478 | 1 | 340 | 0.7302 |
0.8665 |
| 3bz5-assembly1.cif.gz_A | 23 | 477 | 1 | 442 | 0.7165 |
0.7663 |
| 5il7-assembly1.cif.gz_B | 1 | 483 | 1 | 437 | 0.7106 |
0.7603 |
| 4u06-assembly1.cif.gz_A | 39 | 418 | 2 | 344 | 0.7066 |
0.8376 |
| 2omv-assembly1.cif.gz_A | 26 | 475 | 2 | 453 | 0.7045 |
0.7499 |
| 4li1-assembly1.cif.gz_B | 1 | 477 | 1 | 420 | 0.6787 |
0.745 |
| 2omu-assembly1.cif.gz_A | 26 | 475 | 1 | 454 | 0.6614 |
0.7073 |
| 2omx-assembly1.cif.gz_A | 26 | 475 | 1 | 454 | 0.661 |
0.7069 |
| 1o6t-assembly1.cif.gz_A | 28 | 475 | 1 | 454 | 0.6517 |
0.7001 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8Y3L4-F1-model_v4 | 25 | 477 | 56 | 494 | 0.5454 |
0.7649 |
| AF-Q71VU0-F1-model_v4 | 25 | 477 | 56 | 494 | 0.5311 |
0.7634 |
| AF-P0DJM0-F1-model_v4 | 25 | 460 | 31 | 765 | 0.5264 |
0.7247 |
| AF-G2K3G6-F1-model_v4 | 25 | 456 | 32 | 757 | 0.5247 |
0.7294 |
| AF-F1MCA7-F1-model_v4 | 2 | 483 | 19 | 960 | 0.4287 |
0.6553 |
| AF-Q01631-F1-model_v4 | 1 | 473 | 871 | 1544 | 0.4104 |
0.6952 |