PROTEIN: Rep_456_c_0_2
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Protein File & Metadata
Source:
Rep_456_c_0_2.pdb
Genome ID:
Protein ID:
Rep_456_c_0_2
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Protein Sequence
MNIFHRKSLL AACIAAMMGL HGYAQKNEVS PRLSDYFSPA TTNTMSPDSE GFIQRWLLLE 60 PIDKPNRSNT VFTDSYIREA FATEYFPNQF TVLPQDGDKV KVGKQKLTWH ALDSKLFNVK 120 LFRFASGLKK QVYGVLFWAV TVIECPEDME NIRMSVGSNS ASMWWLNGEE AVILSGDRRM 180 VKDDCLSRRL TLKKGKNIIR GAIINGPGMS DFCVRFLNEN GTPVNNITIS YK 232
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 5 | 232 | 1 | 362 | 0.4601 |
0.5947 |
| AF-F1M021-F1-model_v4 | 25 | 232 | 69 | 283 | 0.3525 |
0.6369 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3292 |
0.7205 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 13 | 232 | 350 | 701 | 0.5934 |
0.9453 |
| AF-D7SFH3-F1-model_v4 | GH43_2 | 12 | 232 | 410 | 697 | 0.591 |
0.9345 |
| AF-D5EXY9-F1-model_v4 | CBM6 , GH43_2 | 12 | 232 | 349 | 700 | 0.5865 |
0.9292 |
| AF-A0A7G9XVI1-F1-model_v4 | GH43_2 , GH8 | 5 | 232 | 680 | 1048 | 0.5532 |
0.9276 |
| AF-A0A068NPW6-F1-model_v4 | GH0 | 40 | 232 | 21 | 214 | 0.464 |
0.8553 |
| AF-A0A2S0KVC0-F1-model_v4 | GH0 | 13 | 232 | 16 | 277 | 0.4375 |
0.7814 |
| AF-A0A402CZV5-F1-model_v4 | GH4 | 17 | 221 | 56 | 622 | 0.4283 |
0.7062 |
| AF-A0A344TID5-F1-model_v4 | GH163 | 40 | 222 | 22 | 202 | 0.4237 |
0.8481 |
| AF-A0A518BU48-F1-model_v4 | GH31 | 5 | 232 | 226 | 1029 | 0.4179 |
0.7231 |
| AF-A0A518LMX6-F1-model_v4 | GH31 | 1 | 232 | 83 | 1147 | 0.4156 |
0.701 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| UPS44903.1 | CBM6 , GH43_2 | 13 | 232 | 350 | 701 | 0.5934 |
0.9453 |
| D7SFH3 | GH43_2 | 12 | 232 | 410 | 697 | 0.591 |
0.9345 |
| A0A7G9XVI1 | GH43_2 , GH8 | 5 | 232 | 680 | 1048 | 0.5532 |
0.9276 |
| A0A402CZV5 | GH4 | 17 | 221 | 56 | 622 | 0.4283 |
0.7062 |
| A0A344TID5 | GH163 | 40 | 222 | 22 | 202 | 0.4237 |
0.8481 |
| A0A518BU48 | GH31 | 5 | 232 | 226 | 1029 | 0.4179 |
0.7231 |
| A0A518LMX6 | GH31 | 1 | 232 | 83 | 1147 | 0.4156 |
0.701 |
| A0A380YJ87 | GH20 | 39 | 232 | 396 | 837 | 0.4096 |
0.7647 |
| BCM93550.1 | GH2 | 13 | 232 | 549 | 1135 | 0.3995 |
0.7059 |
| A0A1U9NQX6 | CBM51 , GH20 | 17 | 232 | 506 | 853 | 0.3974 |
0.674 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4lhk-assembly2.cif.gz_B | 42 | 232 | 10 | 202 | 0.5463 |
0.6575 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q92344-F1-model_v4 | 5 | 232 | 1 | 362 | 0.4601 |
0.5947 |
| AF-Q6L8S8-F1-model_v4 | 41 | 232 | 116 | 283 | 0.3292 |
0.7205 |