PROTEIN: HRGMv2_0156_1_2225
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Protein File & Metadata
Source:
HRGMv2_0156_1_2225.pdb
Genome ID:
Protein ID:
HRGMv2_0156_1_2225
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Protein Sequence
MKHLASLFLL SFLLCCSCSQ QMDDEWKPNE QLPNVPETQP VGVSFSRASL ETFAEHGITE 60 VGVYVYLQDS MVYGKNLPLN NGDLKVDLPL GENLQTFIVA NADHLVDTDS LSKVVVYQDA 120 HIQKPVYISD VVGFTSDNSV SSLNVELKRL VGQAVFQPKE TEEELSAITR FDQLNVTFTN 180 VAIGYKVKSK ECITENVTIS TNLSTGFGAS VYSFPTVNGD SRTSIDVVYL KGGEEVNRII 240 SPLDTGIGFE SSKRSTVHMK ITDENYLDEP WPSVRTVMYK STSTQPFTIE VSEF 294
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-I3YKC4-F1-model_v4 | GH28 | 36 | 294 | 32 | 272 | 0.4604 |
0.8009 |
| AF-A0A4V0ZPZ7-F1-model_v4 | GH18 | 27 | 294 | 19 | 306 | 0.4493 |
0.7239 |
| AF-A0A4Y1WMN6-F1-model_v4 | GH28 | 37 | 287 | 23 | 376 | 0.4356 |
0.7224 |
| D7J0Z9 | GH28 | 38 | 286 | 25 | 377 | 0.4267 |
0.7165 |
| A0A412C4E4 | PL0 | 37 | 286 | 44 | 514 | 0.425 |
0.6615 |
| AF-A0A3Q9FNP9-F1-model_v4 | GH5_8 | 34 | 294 | 28 | 229 | 0.3867 |
0.7015 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| I3YKC4 | GH28 | 36 | 294 | 32 | 272 | 0.4604 |
0.8009 |
| A0A4V0ZPZ7 | GH18 | 27 | 294 | 19 | 306 | 0.4493 |
0.7239 |
| A0A4Y1WMN6 | GH28 | 37 | 287 | 23 | 376 | 0.4356 |
0.7224 |
| D7J0Z9 | GH28 | 38 | 286 | 25 | 377 | 0.4267 |
0.7165 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5cag-assembly1.cif.gz_A | 32 | 273 | 10 | 282 | 0.6317 |
0.7663 |
| 3gf8-assembly1.cif.gz_A | 38 | 293 | 1 | 274 | 0.6113 |
0.7086 |
| 4qdg-assembly1.cif.gz_A | 38 | 293 | 6 | 295 | 0.6041 |
0.7172 |
| 3pay-assembly1.cif.gz_B | 39 | 290 | 13 | 298 | 0.5987 |
0.7292 |
| 3pay-assembly1.cif.gz_C | 39 | 290 | 10 | 296 | 0.5966 |
0.7249 |
| 3pay-assembly1.cif.gz_D | 39 | 290 | 13 | 302 | 0.596 |
0.7302 |
| 3pay-assembly1.cif.gz_A | 39 | 290 | 13 | 291 | 0.5905 |
0.7119 |
| 4gpv-assembly1.cif.gz_A | 35 | 294 | 5 | 321 | 0.5792 |
0.7027 |
| 3t2l-assembly1.cif.gz_A-2 | 37 | 277 | 1 | 266 | 0.5792 |
0.7013 |
| 4k4k-assembly2.cif.gz_B | 39 | 294 | 3 | 257 | 0.5779 |
0.6509 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q7MT55-F1-model_v4 | 36 | 294 | 30 | 294 | 0.6211 |
0.7297 |
| AF-A0PA81-F1-model_v4 | 36 | 294 | 30 | 294 | 0.6157 |
0.7237 |
| AF-A0PA72-F1-model_v4 | 36 | 294 | 30 | 294 | 0.613 |
0.7225 |
| AF-A7LXW1-F1-model_v4 | 7 | 273 | 12 | 304 | 0.5928 |
0.7058 |
| AF-A6LHQ9-F1-model_v4 | 26 | 294 | 23 | 309 | 0.5517 |
0.6454 |
| AF-B2RH54-F1-model_v4 | 9 | 294 | 14 | 373 | 0.541 |
0.6456 |
| AF-Q51825-F1-model_v4 | 29 | 294 | 9 | 376 | 0.5405 |
0.6873 |
| AF-Q51822-F1-model_v4 | 11 | 294 | 14 | 374 | 0.5397 |
0.6488 |
| AF-Q93R80-F1-model_v4 | 9 | 294 | 14 | 373 | 0.5392 |
0.6441 |
| AF-P0C940-F1-model_v4 | 9 | 294 | 14 | 373 | 0.5392 |
0.6434 |