PROTEIN: HRGMv2_0159_38_16
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Protein File & Metadata
Source:
HRGMv2_0159_38_16.pdb
Genome ID:
Protein ID:
HRGMv2_0159_38_16
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Protein Sequence
MKQNYNYIFL LTCLIIGGTA CSHKYRTSSS KPIETFFKNE VKPEKFIECF PGAYYRKVNS 60 SKDVWLGVGG TVTLPQLSFD QTRKNTKKPG QFLDNPSVYL GGNMGDQETD FGLAWEVIRE 120 KDGKLSKERK AFRPFMRRSE HINGQEPNYA QAPPEDKYYW YPGEKVTMYF QVLEPRKVHF 180 VIEGAGKRFE CDYDCEGYIP GELGTFKRVN AIDQVANEGK PAQATKTKVL NSRWDESYYF 240 RKYKNEIVKV PIHEGRFTDM RCPDSHFFEV TSTDEGRKIG AETISINGNG Y 291
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-U7PNY3-F1-model_v4 | 42 | 287 | 52 | 284 | 0.6115 |
0.7639 |
| AF-U7Q6Y8-F1-model_v4 | 44 | 287 | 58 | 269 | 0.604 |
0.8002 |
| AF-A0A175W876-F1-model_v4 | 44 | 290 | 65 | 279 | 0.5884 |
0.7841 |
| AF-F4K4G7-F1-model_v4 | 47 | 291 | 81 | 331 | 0.5645 |
0.7203 |
| AF-A0A1D6NMX7-F1-model_v4 | 33 | 291 | 95 | 435 | 0.5162 |
0.6981 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A193KAE4-F1-model_v4 | GH16_25 | 52 | 291 | 51 | 273 | 0.5347 |
0.6862 |
| AF-A0A812GZD9-F1-model_v4 | GH16_25 | 52 | 290 | 49 | 268 | 0.5339 |
0.6859 |
| AF-A0A4P2PU38-F1-model_v4 | CBM5 | 44 | 291 | 51 | 341 | 0.5338 |
0.6809 |
| CAE6889705.1 | GH16_25 | 52 | 291 | 52 | 274 | 0.5326 |
0.6846 |
| AF-S4Y4P1-F1-model_v4 | CBM5 | 50 | 291 | 55 | 332 | 0.5269 |
0.6818 |
| AF-A0A4P2QUF1-F1-model_v4 | CBM5 | 51 | 291 | 56 | 339 | 0.5239 |
0.6865 |
| AF-A0A2H5DYI7-F1-model_v4 | CBM13 | 51 | 291 | 23 | 287 | 0.5024 |
0.6739 |
| A0A344UM69 | CBM13 | 51 | 291 | 25 | 291 | 0.5008 |
0.6745 |
| AF-A0A344UM69-F1-model_v4 | CBM13 | 51 | 291 | 25 | 291 | 0.5008 |
0.6745 |
| AF-Q7NYA5-F1-model_v4 | CBM13 | 51 | 291 | 24 | 288 | 0.5001 |
0.6709 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| CAE6889705.1 | GH16_25 | 52 | 291 | 52 | 274 | 0.5326 |
0.6846 |
| A0A344UM69 | CBM13 | 51 | 291 | 25 | 291 | 0.5008 |
0.6745 |
| A0A0S2FAK0 | CBM13 | 51 | 291 | 23 | 246 | 0.4919 |
0.7082 |
| A0A2M9K2I4 | CBM13 | 51 | 291 | 32 | 301 | 0.4913 |
0.6685 |
| A0A7H8JX45 | CBM13 | 46 | 291 | 9 | 331 | 0.4777 |
0.6662 |
| QMU67046.1 | CBM5 | 44 | 291 | 108 | 315 | 0.475 |
0.803 |
| A0A4V0NDU2 | GH16_25 | 51 | 291 | 27 | 249 | 0.4623 |
0.6971 |
| A0A0S2F5M6 | CBM13 | 49 | 291 | 127 | 393 | 0.4485 |
0.663 |
| A0A1B1B2K8 | CBM13 | 51 | 291 | 36 | 330 | 0.4407 |
0.6665 |
| U3P599 | CBM13 | 49 | 291 | 49 | 320 | 0.4388 |
0.6675 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4hfs-assembly1.cif.gz_B | 47 | 288 | 1 | 203 | 0.6811 |
0.8201 |
| 2ifw-assembly2.cif.gz_B | 50 | 287 | 1 | 206 | 0.6504 |
0.7799 |
| 2ifr-assembly1.cif.gz_A | 51 | 287 | 2 | 204 | 0.6487 |
0.7846 |
| 1s2k-assembly1.cif.gz_A | 51 | 287 | 2 | 199 | 0.6403 |
0.7817 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O31803-F1-model_v4 | 42 | 288 | 42 | 250 | 0.6239 |
0.8094 |
| AF-O05411-F1-model_v4 | 47 | 289 | 36 | 235 | 0.616 |
0.8087 |
| AF-P15369-F1-model_v4 | 44 | 291 | 19 | 260 | 0.6012 |
0.6976 |
| AF-P24665-F1-model_v4 | 42 | 287 | 55 | 282 | 0.5923 |
0.7517 |