dbCAN Logo

PROTEIN: HRGMv2_0159_38_15

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
HRGMv2_0159_38_15.pdb
Genome ID:
PUL0417_HRGMv2_0159_C0
Protein ID:
HRGMv2_0159_38_15

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKKYLFYSLF   LSLAMGFYNC   SDSDDGEPEP   EPTDPINTYF   KDEIKPQASV   ACFAGAYYHK 60
AVTSKDLWLG   IGGTIKLPTA   TFDEDRKNPG   KPGQYLDNPS   IYLGGNMGGQ   ETDIGLTWEV 120
IKDEQGNISA   ERKAFRPFMR   RTSHSSGQAS   NYSNAPAQKE   YYWYPGEEVT   ISIQIIRSGV 180
LKFIVDGNGK   HYESEYECAG   YKQGTRGEFK   RVNAIDQVSN   EGKPTQATNT   KVEGAQWKES 240
FLFRMYDGKI   VKAPLHTGRY   TDMRCPDAMY   FDINSTEAEQ   KIGAESVNIN   GTGY 294
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0P0VA29-F1-model_v4 54 294 21 261 0.6126 0.7169
AF-U7PNY3-F1-model_v4 45 290 52 284 0.6047 0.759
AF-U7Q6Y8-F1-model_v4 47 290 58 269 0.5985 0.7969
AF-A0A175W876-F1-model_v4 46 293 64 279 0.5825 0.775
AF-F4K4G7-F1-model_v4 50 294 81 331 0.5606 0.7209
AF-Q0J3L1-F1-model_v4 49 294 165 431 0.5162 0.734
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A812GZD9-F1-model_v4 GH16_25 55 293 49 268 0.5355 0.6902
AF-A0A193KAE4-F1-model_v4 GH16_25 55 294 51 273 0.5347 0.6881
CAE6889705.1 GH16_25 55 294 52 274 0.5336 0.687
AF-A0A4P2PU38-F1-model_v4 CBM5 47 294 51 341 0.5311 0.6825
AF-S4Y4P1-F1-model_v4 CBM5 53 294 55 332 0.525 0.6823
AF-A0A4P2QUF1-F1-model_v4 CBM5 4 294 10 339 0.5247 0.5836
AF-A0A7H1BH52-F1-model_v4 CBM13 2 294 26 307 0.5024 0.6106
AF-Q7NYA5-F1-model_v4 CBM13 54 294 23 288 0.5022 0.6775
AF-A0A2H5DYI7-F1-model_v4 CBM13 54 294 23 287 0.5018 0.6762
AF-A0A344UM69-F1-model_v4 CBM13 9 294 9 291 0.5015 0.5887
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
CAE6889705.1 GH16_25 55 294 52 274 0.5336 0.687
A0A344UM69 CBM13 9 294 9 291 0.5015 0.5887
A0A0S2FAK0 CBM13 54 294 23 246 0.4909 0.7121
A0A2M9K2I4 CBM13 54 294 32 301 0.49 0.6701
UUN26686.1 CBM13 54 294 22 319 0.4801 0.6552
A0A7H8JX45 CBM13 49 294 9 331 0.477 0.6683
WDD90467.1 CBM13 54 294 44 270 0.4709 0.6907
QMU67046.1 CBM5 47 294 108 315 0.469 0.7959
A0A0S2F5M6 CBM13 1 294 106 393 0.4595 0.5875
A0A4V0NDU2 GH16_25 54 294 27 249 0.4582 0.6944
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4hfs-assembly1.cif.gz_B 50 291 1 203 0.6818 0.8237
2ifw-assembly2.cif.gz_B 53 290 1 206 0.6442 0.7753
2ifr-assembly1.cif.gz_A 54 294 2 204 0.6432 0.7812
1s2k-assembly1.cif.gz_A 53 290 1 199 0.6333 0.7731
1cpn-assembly1.cif.gz_A 56 293 1 208 0.5872 0.7092
1cpm-assembly1.cif.gz_A 55 293 1 211 0.5813 0.7028
1zm1-assembly1.cif.gz_B 55 294 4 231 0.5801 0.68
3axd-assembly1.cif.gz_A 55 294 4 231 0.5725 0.6815
3h0o-assembly1.cif.gz_A 55 294 4 231 0.5723 0.6801
3hr9-assembly1.cif.gz_A 55 294 5 232 0.5713 0.6801
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-O31803-F1-model_v4 45 291 42 250 0.6246 0.8128
AF-O05411-F1-model_v4 50 292 36 235 0.6165 0.8126
AF-P15369-F1-model_v4 47 294 19 260 0.595 0.6936
AF-P24665-F1-model_v4 45 290 55 282 0.5868 0.7491
Download Full SwissProt Results