PROTEIN: VV1_3215
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Protein File & Metadata
Source:
VV1_3215.pdb
Genome ID:
Protein ID:
VV1_3215
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Protein Sequence
MEKILMLIRT PSLAFDDRVR KEARTLSKFS RVVISSFENR HDDIDSEYES VQVIRHNLKT 60 RMIFPKGNLV AFKIIEMYMR YVSKFLDEKP DVCWIHNFES IGMVYILRII KHLTRADFKV 120 VWDQHELPPS SFLKSKWKKI FYRKALSLSD MNIVACDERA KYINNCLNDN VQFTIINNYP 180 DEVFYERKAG EIDPSIVTWL NGDEYFLCQG GMREDRAFFE IVQAAIKEKV KVIFVGPIQE 240 SLNIKLKKFD GHSDYIFIKP SVPQLELVNY IDRSVASLVF YKKGNMNNWL CAPNRLYQSL 300 SRNIPVISGN NPIFQEYREV GVYISDTDGS CSEKIAKSIN DFKKIRPSKS SIIATKWKSQ 360 EEKLNDIFNS KKNP 374
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q2G1K0-F1-model_v4 | 2 | 370 | 1 | 369 | 0.8086 |
0.8332 |
| AF-Q7AQE2-F1-model_v4 | 1 | 372 | 1 | 382 | 0.806 |
0.8413 |
| AF-G3XD85-F1-model_v4 | 1 | 374 | 1 | 373 | 0.8021 |
0.8207 |
| AF-Q5FAD9-F1-model_v4 | 2 | 370 | 1 | 354 | 0.7965 |
0.8381 |
| AF-Q59002-F1-model_v4 | 2 | 374 | 1 | 388 | 0.7932 |
0.8307 |
| AF-Q58459-F1-model_v4 | 1 | 372 | 4 | 406 | 0.7921 |
0.8455 |
| AF-Q9HZ80-F1-model_v4 | 2 | 373 | 1 | 412 | 0.7916 |
0.854 |
| AF-Q0P9C7-F1-model_v4 | 1 | 370 | 1 | 365 | 0.79 |
0.8215 |
| AF-Q58577-F1-model_v4 | 1 | 373 | 3 | 351 | 0.7871 |
0.8364 |
| AF-Q0P9C5-F1-model_v4 | 1 | 374 | 1 | 359 | 0.7867 |
0.821 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3Q0MF71-F1-model_v4 | GT4 | 1 | 374 | 1 | 374 | 0.9821 |
0.9869 |
| QTE96329.1 | GT4 | 1 | 372 | 1 | 373 | 0.9103 |
0.9299 |
| BCV31893.1 | GT4 | 6 | 367 | 1 | 368 | 0.9081 |
0.9421 |
| WIF96087.1 | GT4 | 1 | 371 | 2 | 376 | 0.8578 |
0.8835 |
| Q5LH98 | GT4 | 1 | 370 | 1 | 371 | 0.8555 |
0.8779 |
| QRP88515.1 | GT4 | 1 | 369 | 1 | 362 | 0.8544 |
0.8852 |
| A0A6I7MEA3 | GT4 | 1 | 373 | 6 | 383 | 0.8495 |
0.8788 |
| AF-A0A1B2Z167-F1-model_v4 | GT4 | 1 | 369 | 3 | 365 | 0.8428 |
0.8729 |
| AF-B9EAW2-F1-model_v4 | GT4 | 6 | 374 | 1 | 384 | 0.8418 |
0.8799 |
| AF-W6QWD6-F1-model_v4 | GT4 | 6 | 374 | 1 | 378 | 0.8372 |
0.8724 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3Q0MF71 | GT4 | 1 | 374 | 1 | 374 | 0.9821 |
0.9869 |
| QTE96329.1 | GT4 | 1 | 372 | 1 | 373 | 0.9103 |
0.9299 |
| BCV31893.1 | GT4 | 6 | 367 | 1 | 368 | 0.9081 |
0.9421 |
| A0A345UMM2 | GT4 | 1 | 372 | 3 | 374 | 0.9014 |
0.9192 |
| WIF96087.1 | GT4 | 1 | 371 | 2 | 376 | 0.8578 |
0.8835 |
| Q5LH98 | GT4 | 1 | 370 | 1 | 371 | 0.8555 |
0.8779 |
| QRP88515.1 | GT4 | 1 | 369 | 1 | 362 | 0.8544 |
0.8852 |
| A0A6I7MEA3 | GT4 | 1 | 373 | 6 | 383 | 0.8495 |
0.8788 |
| A0A9Q9BMX1 | GT4 | 1 | 374 | 1 | 389 | 0.8477 |
0.881 |
| A0A2K8VEA2 | GT4 | 1 | 370 | 4 | 368 | 0.8477 |
0.8762 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3mbo-assembly2.cif.gz_C | 1 | 374 | 1 | 373 | 0.805 |
0.8282 |
| 3mbo-assembly3.cif.gz_E | 1 | 374 | 1 | 375 | 0.8008 |
0.8249 |
| 6kih-assembly2.cif.gz_B | 1 | 374 | 1 | 399 | 0.8004 |
0.8439 |
| 3c4q-assembly1.cif.gz_A | 2 | 374 | 1 | 393 | 0.7999 |
0.8403 |
| 3c4q-assembly2.cif.gz_B | 2 | 374 | 1 | 393 | 0.7992 |
0.8393 |
| 4xsr-assembly1.cif.gz_B | 1 | 371 | 1 | 364 | 0.7992 |
0.829 |
| 4xsu-assembly1.cif.gz_B | 1 | 371 | 1 | 367 | 0.7989 |
0.8253 |
| 6n1x-assembly1.cif.gz_A | 1 | 374 | 4 | 377 | 0.7983 |
0.824 |
| 4xsu-assembly1.cif.gz_A | 1 | 371 | 1 | 368 | 0.7974 |
0.8226 |
| 3mbo-assembly4.cif.gz_H | 1 | 374 | 1 | 369 | 0.7953 |
0.8238 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q81ST7-F1-model_v4 | 1 | 374 | 2 | 379 | 0.801 |
0.8297 |
| AF-P42982-F1-model_v4 | 1 | 374 | 3 | 377 | 0.7996 |
0.8247 |
| AF-Q59002-F1-model_v4 | 2 | 374 | 1 | 388 | 0.7932 |
0.8307 |
| AF-Q58459-F1-model_v4 | 1 | 372 | 4 | 406 | 0.7921 |
0.8455 |
| AF-Q0P9C7-F1-model_v4 | 1 | 370 | 1 | 365 | 0.79 |
0.8215 |
| AF-Q48453-F1-model_v4 | 2 | 371 | 1 | 358 | 0.7888 |
0.8235 |
| AF-Q58577-F1-model_v4 | 1 | 373 | 3 | 351 | 0.7871 |
0.8364 |
| AF-Q0P9C5-F1-model_v4 | 1 | 374 | 1 | 359 | 0.7867 |
0.821 |
| AF-Q4H4F8-F1-model_v4 | 11 | 374 | 1 | 386 | 0.7858 |
0.8415 |
| AF-A4QB40-F1-model_v4 | 2 | 374 | 1 | 412 | 0.7847 |
0.847 |