PROTEIN: VDS02727.1
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Protein File & Metadata
Source:
VDS02727.1.pdb
Genome ID:
Protein ID:
VDS02727.1
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Protein Sequence
MGPDQAIPSQ GTFRSFSVYE MPFDSYDRER KGLFTRKMYR TIAPWTTENP IFMHLTSTNP 60 ETVYRAIDQC AETGYEMIIL SFGSGLNAED ISDANIAKYK AFVDYARNKG IEMGCYSLLA 120 SRWISDEVDV INPKTGKRGG MTFGSSPCLC SDWGYEYFHK IKTFFEKTGM RCFEHDGSYP 180 GDFCASTVHP HHKGLKDSQW NQFHKVTELY HWMCENGIYL NVPDFYFLNG STKVGIGYRE 240 ANWSLPRDRQ LIHTRQLNYD CTFERIPSSL WSFVPLVEYQ GGGAAATLEP LSEHLYEYKT 300 LMFQNYGAGV QACYRGPRLY DTPETKKAVV EIISWYKKYR NILNSDIIHL RKPDARDWDG 360 IMHVAPAGKE KGLAMFYNPT DKEMTRDIQL PLYYTGLTKT ACIREQEGTP ATYTLNRDYT 420 VNLTVKIPAK GYTWYVIE 438
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55B10-F1-model_v4 | 34 | 438 | 12 | 382 | 0.6619 |
0.7468 |
| AF-A0A077Z3S2-F1-model_v4 | 9 | 438 | 12 | 411 | 0.6489 |
0.7064 |
| AF-Q9VL27-F1-model_v4 | 22 | 438 | 8 | 407 | 0.6476 |
0.7052 |
| AF-Q8VXZ7-F1-model_v4 | 17 | 438 | 26 | 428 | 0.6457 |
0.7163 |
| AF-P17050-F1-model_v4 | 9 | 438 | 8 | 401 | 0.6448 |
0.7102 |
| AF-Q9QWR8-F1-model_v4 | 10 | 438 | 9 | 401 | 0.6433 |
0.7125 |
| AF-A0A0N4URH1-F1-model_v4 | 8 | 438 | 7 | 396 | 0.6425 |
0.7044 |
| AF-Q7K127-F1-model_v4 | 22 | 438 | 14 | 415 | 0.6417 |
0.6992 |
| AF-A0A0K0ENI1-F1-model_v4 | 14 | 438 | 12 | 405 | 0.6406 |
0.7106 |
| AF-Q66H12-F1-model_v4 | 12 | 438 | 10 | 401 | 0.6397 |
0.7114 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A2Z4IQ08-F1-model_v4 | CBM51 | 1 | 438 | 412 | 925 | 0.7321 |
0.9962 |
| AF-A0A7T4QWU3-F1-model_v4 | CBM51 | 1 | 438 | 421 | 936 | 0.7308 |
0.9981 |
| AF-A0A0I9S7D9-F1-model_v4 | CBM51 | 1 | 438 | 421 | 936 | 0.7308 |
0.9981 |
| AF-A0A4Q0TXP5-F1-model_v4 | CBM51 | 1 | 438 | 421 | 936 | 0.7305 |
0.9978 |
| AF-A0A7L5EF92-F1-model_v4 | CBM51 | 1 | 438 | 420 | 935 | 0.7305 |
0.9983 |
| A0A3R6FCF2 | CBM51 | 1 | 438 | 420 | 935 | 0.7298 |
0.9975 |
| AF-A0A6H1D4V1-F1-model_v4 | CBM51 | 1 | 438 | 420 | 935 | 0.7298 |
0.9974 |
| AF-A6LER9-F1-model_v4 | CBM51 | 1 | 438 | 420 | 935 | 0.7297 |
0.9973 |
| QZE13926.1 | CBM51 | 1 | 438 | 416 | 931 | 0.7293 |
0.9945 |
| AF-A0A221UVN7-F1-model_v4 | CBM51 | 1 | 438 | 424 | 937 | 0.7285 |
0.9955 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3R6FCF2 | CBM51 | 1 | 438 | 420 | 935 | 0.7298 |
0.9975 |
| QZE13926.1 | CBM51 | 1 | 438 | 416 | 931 | 0.7293 |
0.9945 |
| A0A1X9ZBH8 | CBM51 | 1 | 438 | 423 | 940 | 0.7268 |
0.9942 |
| K6A412 | CBM51 | 1 | 438 | 426 | 942 | 0.7264 |
0.9946 |
| D1CHX1 | GH36 | 2 | 438 | 90 | 527 | 0.7045 |
0.7853 |
| A0A6C0FRP8 | GH36 | 1 | 438 | 30 | 605 | 0.6886 |
0.8132 |
| A0A3G3JVU9 | GH36 | 1 | 438 | 69 | 652 | 0.6734 |
0.8157 |
| D1CHK2 | GH36 | 1 | 438 | 84 | 655 | 0.6722 |
0.8151 |
| QTD38447.1 | CE6 | 1 | 438 | 684 | 1195 | 0.6721 |
0.9862 |
| F4A112 | GH36 | 1 | 438 | 67 | 633 | 0.6708 |
0.8055 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4nzf-assembly1.cif.gz_A | 38 | 438 | 1 | 428 | 0.6614 |
0.7335 |
| 3igu-assembly1.cif.gz_B | 40 | 438 | 1 | 384 | 0.6529 |
0.7159 |
| 4gkl-assembly2.cif.gz_B | 45 | 438 | 1 | 418 | 0.6526 |
0.7255 |
| 1ktb-assembly1.cif.gz_A | 40 | 438 | 1 | 385 | 0.6517 |
0.7135 |
| 5a2c-assembly1.cif.gz_A | 44 | 438 | 1 | 447 | 0.65 |
0.7427 |
| 3wy4-assembly2.cif.gz_B | 44 | 438 | 2 | 421 | 0.6427 |
0.7116 |
| 3a5v-assembly1.cif.gz_A | 40 | 438 | 1 | 392 | 0.6404 |
0.698 |
| 8sdb-assembly4.cif.gz_D | 44 | 436 | 14 | 496 | 0.6296 |
0.7539 |
| 7qqg-assembly1.cif.gz_D | 21 | 438 | 40 | 496 | 0.6284 |
0.715 |
| 4fnr-assembly1.cif.gz_D | 1 | 438 | 157 | 717 | 0.6273 |
0.7861 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q55B10-F1-model_v4 | 34 | 438 | 12 | 382 | 0.6619 |
0.7468 |
| AF-Q8VXZ7-F1-model_v4 | 17 | 438 | 26 | 428 | 0.6457 |
0.7163 |
| AF-P17050-F1-model_v4 | 9 | 438 | 8 | 401 | 0.6448 |
0.7102 |
| AF-Q9QWR8-F1-model_v4 | 10 | 438 | 9 | 401 | 0.6433 |
0.7125 |
| AF-P27756-F1-model_v4 | 1 | 438 | 161 | 719 | 0.6261 |
0.7853 |
| AF-P16551-F1-model_v4 | 1 | 438 | 131 | 705 | 0.6253 |
0.7797 |
| AF-Q9ALJ4-F1-model_v4 | 1 | 438 | 166 | 726 | 0.6253 |
0.788 |
| AF-Q9URZ0-F1-model_v4 | 38 | 438 | 22 | 419 | 0.6238 |
0.6991 |
| AF-G1UB44-F1-model_v4 | 1 | 438 | 171 | 730 | 0.6237 |
0.7871 |
| AF-P43467-F1-model_v4 | 1 | 438 | 169 | 729 | 0.6237 |
0.7874 |