PROTEIN: LSEI_RS12810
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Protein File & Metadata
Source:
LSEI_RS12810.pdb
Genome ID:
Protein ID:
LSEI_RS12810
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Protein Sequence
MEIALLSASD QVIDTSRNGE SDGYLRLDHV YAEGDYVQVE FERQLLPGFF WVQVDAALVP 60 SLLYFTQSTW HYVIPTDELA VTHPEHESIY PETAFAGKTH LIRIWKPDAS EVSEERNVAF 120 NSHDQAVHSG AYPHASANIE TRHDPTFAAR NAIDGYRLND HYGKFPYQSW GINQDPTARF 180 TLTFGRPIKL TRLAITLRAD FPHDSYWTQG TLRLSDGSQM LLHFTKTDQR QMFDINKEGI 240 SELQLSDLIK ADDDSPFPAL IEIEAYGCEL VEEIAN 276
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8IKW0-F1-model_v4 | 9 | 276 | 173 | 692 | 0.3278 |
0.5144 |
| AF-Q8I252-F1-model_v4 | 19 | 276 | 309 | 843 | 0.3079 |
0.5215 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 273 | 38 | 372 | 0.5558 |
0.898 |
| AF-A0A4Y6CEF2-F1-model_v4 | CBM32 | 3 | 268 | 37 | 328 | 0.5072 |
0.5905 |
| AF-Q1D2P6-F1-model_v4 | CBM32 | 9 | 268 | 109 | 407 | 0.4423 |
0.5675 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 8 | 268 | 23 | 456 | 0.3912 |
0.6311 |
| AF-A0A7H8JXZ3-F1-model_v4 | GH20 | 1 | 269 | 39 | 658 | 0.3859 |
0.56 |
| AF-F3ZWG9-F1-model_v4 | GH43_33 | 55 | 271 | 254 | 520 | 0.3756 |
0.619 |
| AF-A0A4P6YHP5-F1-model_v4 | GH128 | 12 | 276 | 168 | 699 | 0.368 |
0.5665 |
| AF-A0A4P6YB92-F1-model_v4 | GH128 | 1 | 276 | 173 | 713 | 0.3651 |
0.5445 |
| AF-W5W840-F1-model_v4 | GH142 | 21 | 270 | 134 | 682 | 0.3565 |
0.5592 |
| AF-A0A7G6VRF1-F1-model_v4 | GH142 | 33 | 274 | 91 | 676 | 0.3341 |
0.5318 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 273 | 38 | 372 | 0.5558 |
0.898 |
| Q1D2P6 | CBM32 | 9 | 268 | 109 | 407 | 0.4423 |
0.5675 |
| C6W2B2 | CBM32 | 1 | 268 | 267 | 478 | 0.4311 |
0.6982 |
| A0A1Y0FYD6 | CBM32 | 1 | 268 | 297 | 510 | 0.4285 |
0.7042 |
| A0A061B3V4 | AA14 | 8 | 268 | 23 | 456 | 0.3912 |
0.6311 |
| A0A6B8RL96 | CBM32 , GH26 | 1 | 269 | 43 | 482 | 0.389 |
0.5138 |
| F3ZWG9 | GH43_33 | 55 | 271 | 254 | 520 | 0.3756 |
0.619 |
| A0A4P6YB92 | GH128 | 1 | 276 | 173 | 713 | 0.3651 |
0.5445 |
| G0I868 | CBM47 | 4 | 270 | 129 | 782 | 0.3638 |
0.5805 |
| UNT92137.1 | CBM32 , GH20 | 11 | 276 | 186 | 581 | 0.3592 |
0.5404 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - SwissProt
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.