PROTEIN: LC705_RS12730
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Protein File & Metadata
Source:
LC705_RS12730.pdb
Genome ID:
Protein ID:
LC705_RS12730
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Protein Sequence
MLISLISAKS RIDSDLRSDE SDAELILDHL YVKGDYLEIA FEPQTLPCFR WIQVDAALSP 60 SLVYFTQTPW RYHIPTNYLR VTEPAHESIF PEMAFAGREH VIRIWRPDVV DLKGERNLAL 120 NCHDQAADMG AFPHASANIE TRHDPTFAAR NAIDGYRLNH HHGKFPYQSW GINQDPKASF 180 EIDFGRNVNL DHAVITLRAD FPHDSYWKQG TMTFSDGSQM VIHFSKTDNQ QTFTINKSNI 240 RSIRLSELVK AEDDSPFPAL TELEVYGSET FEEMKH 276
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9I3J8-F1-model_v4 | 1 | 272 | 82 | 332 | 0.5011 |
0.6124 |
| AF-Q8CY62-F1-model_v4 | 4 | 268 | 195 | 744 | 0.3394 |
0.561 |
| AF-Q8I252-F1-model_v4 | 18 | 276 | 309 | 726 | 0.3106 |
0.5241 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| B1C4D3 | GH105 | 1 | 274 | 38 | 373 | 0.5531 |
0.8908 |
| A0A9E9K109 | CBM32 | 5 | 276 | 1 | 543 | 0.4386 |
0.6035 |
| QRN99367.1 | CBM47 | 2 | 266 | 147 | 708 | 0.3946 |
0.5937 |
| AF-A0A061B3V4-F1-model_v4 | AA14 | 7 | 268 | 24 | 456 | 0.3895 |
0.6244 |
| AF-F3ZWG9-F1-model_v4 | GH43_33 | 55 | 271 | 254 | 520 | 0.3761 |
0.6199 |
| A0A9W6Q4Z5 | CBM32 , CBM66 , GH0 | 2 | 267 | 664 | 1090 | 0.3693 |
0.6154 |
| AF-A0A4P6YHP5-F1-model_v4 | GH128 | 11 | 276 | 168 | 764 | 0.3686 |
0.5648 |
| AF-A0A4P6YB92-F1-model_v4 | GH128 | 1 | 276 | 177 | 783 | 0.3685 |
0.5493 |
| AF-C7QBZ7-F1-model_v4 | CBM32 , GH30_3 | 2 | 269 | 285 | 660 | 0.3666 |
0.5359 |
| AF-W5W840-F1-model_v4 | GH142 | 57 | 271 | 77 | 682 | 0.3654 |
0.6577 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A2G4YLU0 | CBM47 | 113 | 276 | 23 | 173 | 0.5572 |
0.8379 |
| B1C4D3 | GH105 | 1 | 274 | 38 | 373 | 0.5531 |
0.8908 |
| Q1D2P6 | CBM32 | 8 | 268 | 110 | 407 | 0.4418 |
0.5649 |
| UVH36227.1 | CBM47 | 1 | 273 | 196 | 489 | 0.4396 |
0.5969 |
| A0A9E9K109 | CBM32 | 5 | 276 | 1 | 543 | 0.4386 |
0.6035 |
| QRN99367.1 | CBM47 | 2 | 266 | 147 | 708 | 0.3946 |
0.5937 |
| A0A061B3V4 | AA14 | 7 | 268 | 24 | 456 | 0.3895 |
0.6244 |
| F3ZWG9 | GH43_33 | 55 | 271 | 254 | 520 | 0.3761 |
0.6199 |
| A0A9W6Q4Z5 | CBM32 , CBM66 , GH0 | 2 | 267 | 664 | 1090 | 0.3693 |
0.6154 |
| A0A4P6YB92 | GH128 | 1 | 276 | 177 | 783 | 0.3685 |
0.5493 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 3cqo-assembly1.cif.gz_C | 113 | 276 | 1 | 156 | 0.4519 |
0.8091 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q02JZ8-F1-model_v4 | 1 | 272 | 81 | 332 | 0.5018 |
0.6114 |
| AF-Q9I3J8-F1-model_v4 | 1 | 272 | 82 | 332 | 0.5011 |
0.6124 |
| AF-Q6LPX9-F1-model_v4 | 1 | 271 | 80 | 330 | 0.499 |
0.6078 |
| AF-A4VP32-F1-model_v4 | 1 | 271 | 81 | 331 | 0.4989 |
0.6068 |
| AF-Q3KFK9-F1-model_v4 | 1 | 271 | 81 | 331 | 0.4987 |
0.6073 |
| AF-Q4K8H3-F1-model_v4 | 1 | 271 | 81 | 331 | 0.4972 |
0.606 |
| AF-Q5YP02-F1-model_v4 | 1 | 271 | 88 | 329 | 0.4945 |
0.6207 |
| AF-Q9RKU4-F1-model_v4 | 1 | 274 | 118 | 365 | 0.4822 |
0.6241 |
| AF-Q82LL5-F1-model_v4 | 1 | 274 | 118 | 365 | 0.4783 |
0.6197 |