dbCAN Logo

PROTEIN: MurphyR_2019_SRR7411342_bin.1_k141_35785_30

Loading protein structure...

Protein File & Metadata
Download PDB File
Source:
MurphyR_2019_SRR7411342_bin.1_k141_35785_30.pdb
Genome ID:
MurphyR_2019_SRR7411342_bin.1
Protein ID:
MurphyR_2019_SRR7411342_bin.1_k141_35785_30

Loading protein structure information...

Detailed structural information will appear here after analysis...

Protein Sequence 
MKPFTRVLSA   FAVGILLQGG   VYLYLDQYMF   APTTEFNVSG   ASKDDTKNFP   DVKEGRKYVS 60
YDHQFMAVVT   DESLRIYKAG   ESKPTTVSLK   GRSISYFDWM   PDRNYAIMGL   YTDNKVVMAR 120
LNADDSEHEV   DTELEDVPKG   SRIVDAAYSE   ATNVVYMKVK   VREGAYRIYR   TDANYDTRRV 180
YMQATDIGRI   AVFYDEDNFF   YDNAKTGDIF   MFNGIEGGWR   VINPPGRFRL   LGVDTSKTIY 240
IARVDEDNNV   LTVYSGKLGV   GFKPIYKYNN   PTTLSEVTMN   AVKEIIANGS   DDTTKVIEDN 300
DKSSKDSSSK   KKN 313
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-B0BNA7-F1-model_v4 28 301 18 324 0.576 0.69
AF-Q6Z6C8-F1-model_v4 26 307 26 313 0.5668 0.6751
AF-I1MX41-F1-model_v4 1 298 1 328 0.5642 0.6362
AF-K7M609-F1-model_v4 1 298 1 328 0.5615 0.634
AF-A0A077Z0V1-F1-model_v4 26 301 33 315 0.5281 0.663
AF-P92976-F1-model_v4 28 287 46 329 0.5239 0.6567
AF-K7LIT2-F1-model_v4 37 289 138 428 0.5217 0.7572
AF-E7F4J8-F1-model_v4 43 293 75 356 0.5189 0.7496
AF-Q9P2S5-F1-model_v4 40 299 11 365 0.5112 0.7283
AF-Q69U01-F1-model_v4 42 288 47 350 0.5065 0.6784
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6H1P5T6-F1-model_v4 CBM50 27 288 159 472 0.5128 0.7353
UZD13854.1 CBM50 30 283 199 464 0.5065 0.7562
AF-A0A5Q2TEF5-F1-model_v4 CBM50 27 291 159 502 0.4812 0.7408
A0A1H8SW06 CBM50 27 284 159 469 0.4811 0.7605
AF-A0A810E6E5-F1-model_v4 CBM50 27 288 159 473 0.4811 0.7484
A0A975GAQ9 CBM54 1 303 142 1021 0.4158 0.7074
VEG07330.1 GH39 16 300 18 640 0.3954 0.6917
A0A518G9Z4 CBM57 30 313 523 1273 0.3835 0.7161
A0A3N1P395 GH19_2 , GH20 42 288 825 1087 0.3327 0.6602
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UZD13854.1 CBM50 30 283 199 464 0.5065 0.7562
A0A1H8SW06 CBM50 27 284 159 469 0.4811 0.7605
A0A975GAQ9 CBM54 1 303 142 1021 0.4158 0.7074
VEG07330.1 GH39 16 300 18 640 0.3954 0.6917
A0A518G9Z4 CBM57 30 313 523 1273 0.3835 0.7161
A0A7R8X6P4 GT58 1 299 293 717 0.3525 0.6488
A0A3N1P395 GH19_2 , GH20 42 288 825 1087 0.3327 0.6602
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
8wc4-assembly1.cif.gz_B 28 287 58 334 0.5705 0.7188
5mzh-assembly2.cif.gz_B 14 297 1 412 0.5687 0.7214
6m8s-assembly1.cif.gz_D 28 287 62 333 0.5618 0.7064
7sse-assembly1.cif.gz_B 44 292 2 255 0.5614 0.6941
7mqa-assembly1.cif.gz_SG 8 298 8 389 0.5602 0.6788
7t6t-assembly1.cif.gz_B 28 287 59 336 0.5586 0.7042
6bm0-assembly1.cif.gz_B 16 292 16 313 0.5531 0.682
6ah0-assembly1.cif.gz_K 30 295 76 343 0.5466 0.6827
8f8e-assembly1.cif.gz_A 44 293 1 253 0.5447 0.6721
4pxw-assembly2.cif.gz_B 28 295 23 293 0.5431 0.6324
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5EBE8-F1-model_v4 28 301 18 324 0.5762 0.6903
AF-B0BNA7-F1-model_v4 28 301 18 324 0.576 0.69
AF-B4NW98-F1-model_v4 28 300 14 321 0.5758 0.6881
AF-Q5R7R2-F1-model_v4 28 301 18 324 0.5758 0.6898
AF-Q5IH81-F1-model_v4 28 301 18 324 0.5709 0.6905
AF-A0R316-F1-model_v4 28 308 58 358 0.5631 0.688
AF-O31507-F1-model_v4 28 287 85 339 0.5316 0.6825
AF-P0DOC0-F1-model_v4 33 292 89 372 0.5253 0.7362
AF-P92976-F1-model_v4 28 287 46 329 0.5239 0.6567
AF-P0DOB9-F1-model_v4 27 292 89 379 0.5203 0.7204
Download Full SwissProt Results