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PROTEIN: MurphyR_2019_SRR7352066_bin.2_k141_4662_3

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Protein File & Metadata
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Source:
MurphyR_2019_SRR7352066_bin.2_k141_4662_3.pdb
Genome ID:
MurphyR_2019_SRR7352066_bin.2
Protein ID:
MurphyR_2019_SRR7352066_bin.2_k141_4662_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKRKKLAVLI   CAVALAATSI   TGCGVGSGGD   SKAAKDIPKS   ADDVDLSKHV   DISIGGLSLG 60
DSGKDAWPTE   VIKAVEDKFN   CSITTKAYDT   ESLNLDLTGG   NTTDIVQISD   ENIAGVLKGG 120
HAVNLIDYKN   IAPNIFAEPM   EFRNNIMQKF   KSEGEEGAQY   FVTPRVSFEN   QKENYGARLQ 180
YGYVVRWDLY   KAIGCPEINN   DDDYINACLK   MKEIYPKTEN   GDETYAMSAY   NDSGLHSYFF 240
KGCLAEGFIN   LEGGLYVQDV   TTNDLVADVY   DEGYDGTTPF   WSGVEFYNKL   YKAGLLDPDN 300
FITKSEDLTE   KYTKGQYLGG   TTNWFYSNYN   TNNAGTDKEY   IVLPSKLGWC   NEPNRAGYSG 360
KYFFVSSHSK   NVDRAVMVLD   YLQSGEFSRM   SDSGVEGRWE   KGDDGMPHLT   KDTIAMKTDS 420
SRSDEWKESG   IGDTNTGNFT   GWSPDNVLDD   GGCVSLWQEE   SVMKDSLTAA   EKGLCEQFGI 480
NLPSDLLKQR   IESGKSIDQR   DSDGTIRMCL   ETTPKDVVRI   DSNCTEIVTK   ALPSLVQAKT 540
DKEFTDAKEA   LMQQLKDANV   ETSVKWWQEA   WKTSKAAVEK   LETE 584
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 1 577 8 502 0.6542 0.7291
AF-A0A133D019-F1-model_v4 48 577 36 485 0.6382 0.7611
AF-P76042-F1-model_v4 42 566 23 430 0.5726 0.7034
AF-Q8DNH8-F1-model_v4 44 570 28 419 0.5695 0.7151
AF-Q8DRJ6-F1-model_v4 20 583 36 514 0.5674 0.6608
AF-O53485-F1-model_v4 49 570 35 439 0.5674 0.7092
AF-K0F8J3-F1-model_v4 48 570 29 434 0.5669 0.7043
AF-Q8DNU8-F1-model_v4 45 570 36 440 0.5657 0.709
AF-A0A133CPC5-F1-model_v4 44 567 30 423 0.5652 0.7103
AF-Q8DNU2-F1-model_v4 24 570 14 445 0.5645 0.6729
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 580 31 506 0.6554 0.7595
AF-K8EJG7-F1-model_v4 CBM50 , CE4 45 570 31 417 0.549 0.696
A0A9Q8PNJ5 GH4 1 570 113 866 0.4391 0.5416
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 29 580 31 506 0.6554 0.7595
K8EJG7 CBM50 , CE4 45 570 31 417 0.549 0.696
A0A9Q8PNJ5 GH4 1 570 113 866 0.4391 0.5416
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fth-assembly1.cif.gz_A 45 580 1 496 0.7061 0.7806
3omb-assembly1.cif.gz_A 35 576 1 503 0.7049 0.7745
5xs8-assembly1.cif.gz_A 49 575 1 474 0.7013 0.79
5g62-assembly2.cif.gz_B 49 583 1 491 0.7012 0.7785
5g5y-assembly1.cif.gz_A 45 583 1 494 0.6958 0.7717
5h6u-assembly1.cif.gz_A 41 580 1 487 0.6927 0.7724
3vlw-assembly2.cif.gz_B 42 579 2 489 0.6917 0.7713
4tqu-assembly1.cif.gz_Q 42 583 3 492 0.6904 0.7693
6jhx-assembly2.cif.gz_B 42 577 3 483 0.6851 0.7692
5suo-assembly1.cif.gz_A 49 580 1 451 0.6652 0.7651
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 33 583 32 538 0.6949 0.7824
AF-P37966-F1-model_v4 42 576 30 502 0.6556 0.7606
AF-Q795R2-F1-model_v4 23 577 12 498 0.6302 0.7118
AF-Q8FVS7-F1-model_v4 45 567 21 411 0.5857 0.7313
AF-Q578M8-F1-model_v4 45 567 21 411 0.5843 0.7295
AF-Q2YKZ9-F1-model_v4 45 567 21 411 0.5831 0.7281
AF-O50499-F1-model_v4 6 576 3 469 0.5807 0.6643
AF-A0A0H2UMY0-F1-model_v4 6 580 15 491 0.5771 0.6616
AF-P76042-F1-model_v4 42 566 23 430 0.5726 0.7034
AF-Q55471-F1-model_v4 28 566 20 421 0.5682 0.7008
Download Full SwissProt Results