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PROTEIN: MurphyR_2019_SRR7351967_bin.9_k141_18089_15

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Protein File & Metadata
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Source:
MurphyR_2019_SRR7351967_bin.9_k141_18089_15.pdb
Genome ID:
MurphyR_2019_SRR7351967_bin.9
Protein ID:
MurphyR_2019_SRR7351967_bin.9_k141_18089_15

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKPFTRVLSA   FAVGILLQGG   VYLYLDQYMF   APTTEFNVSG   ASKDDTKNFP   DVKEGRKYVS 60
YDHQFMAVVT   DESLRIYKAG   ESKPTTVSLK   GRSISYFDWM   PDRNYAIMGL   YTDNKVVMAR 120
LNADDSEHEV   DTELEDVPKG   SRIVDAAYSE   ATNVVYMKVK   VREGAYRIYR   TDANYDTRRV 180
YMQATDIGRI   AVFYDEDNFF   YDNAKTGDIF   MFNGIEGGWR   VINPPGRFRL   LGVDTSKTIY 240
IARVDEDNNV   LTVYSGKLGV   GFKPIYKYNN   PTTLSEVTMN   AVKEIIANGS   DDTTKVTEDN 300
DKSSKDSSSK   KKN 313
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0N4UQP7-F1-model_v4 49 258 13 217 0.6084 0.7751
AF-B0BNA7-F1-model_v4 28 302 18 325 0.5798 0.6923
AF-B4G1G6-F1-model_v4 25 299 25 306 0.5654 0.6854
AF-Q6Z6C8-F1-model_v4 25 299 25 306 0.565 0.6867
AF-K7M609-F1-model_v4 14 293 8 286 0.5646 0.6693
AF-I1MX41-F1-model_v4 1 297 1 328 0.564 0.6378
AF-A0A077Z0V1-F1-model_v4 23 300 33 315 0.5312 0.6643
AF-P92976-F1-model_v4 28 287 46 329 0.5232 0.6557
AF-A0A1D6I3E1-F1-model_v4 41 289 40 343 0.516 0.6809
AF-Q9SD07-F1-model_v4 27 299 75 370 0.5116 0.6442
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A6H1P5T6-F1-model_v4 CBM50 23 288 158 473 0.5151 0.7304
UZD13854.1 CBM50 28 283 198 464 0.5092 0.7552
AF-A0A810E6E5-F1-model_v4 CBM50 23 287 158 472 0.4849 0.7483
A0A1H8SW06 CBM50 23 284 158 469 0.4844 0.7542
AF-A0A5Q2TEF5-F1-model_v4 CBM50 23 291 158 502 0.4834 0.7355
VEG07330.1 GH39 16 299 18 640 0.398 0.6985
AF-A0A7I7XBZ3-F1-model_v4 GH39 29 289 160 443 0.3971 0.7435
A0A518G9Z4 CBM57 27 313 522 913 0.3741 0.693
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
UZD13854.1 CBM50 28 283 198 464 0.5092 0.7552
A0A1H8SW06 CBM50 23 284 158 469 0.4844 0.7542
A0A975GAQ9 CBM54 1 312 142 1357 0.4238 0.7036
VEG07330.1 GH39 16 299 18 640 0.398 0.6985
A0A7G8PC81 GH39 31 290 377 658 0.3851 0.7476
A0A518G9Z4 CBM57 27 313 522 913 0.3741 0.693
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5gva-assembly1.cif.gz_A 27 297 21 305 0.6142 0.7178
8afy-assembly1.cif.gz_B 29 300 9 315 0.6029 0.7246
8wc4-assembly1.cif.gz_B 27 287 58 334 0.5732 0.7191
5mzh-assembly2.cif.gz_B 11 297 1 412 0.5693 0.7162
6m8s-assembly1.cif.gz_D 27 287 62 333 0.5636 0.7064
7t6t-assembly1.cif.gz_B 28 287 59 336 0.5621 0.7102
7sse-assembly1.cif.gz_B 42 292 2 255 0.5615 0.6896
7rg9-assembly1.cif.gz_B 27 287 62 339 0.56 0.7061
6bm0-assembly1.cif.gz_B 12 295 13 363 0.5561 0.6734
8f8e-assembly1.cif.gz_A 42 293 1 254 0.5497 0.6735
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q5EBE8-F1-model_v4 28 302 18 325 0.58 0.6923
AF-B0BNA7-F1-model_v4 28 302 18 325 0.5798 0.6923
AF-Q66J51-F1-model_v4 28 302 18 325 0.5798 0.6914
AF-B4NW98-F1-model_v4 28 301 14 321 0.5798 0.69
AF-B4KGX9-F1-model_v4 28 301 14 321 0.5796 0.6897
AF-Q5R7R2-F1-model_v4 28 302 18 325 0.5795 0.6916
AF-Q29L19-F1-model_v4 28 298 18 323 0.5777 0.6977
AF-B4LUA5-F1-model_v4 28 298 14 319 0.5775 0.6943
AF-B4GSH1-F1-model_v4 28 301 18 326 0.5774 0.691
AF-Q5IH81-F1-model_v4 28 308 18 332 0.5762 0.6803
Download Full SwissProt Results