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PROTEIN: MGYG000004440_11_40

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Protein File & Metadata
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Source:
MGYG000004440_11_40.pdb
Genome ID:
MGYG000004440
Protein ID:
MGYG000004440_11_40

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Detailed structural information will appear here after analysis...

Protein Sequence 
MQRKIITFTS   IILMALTAFA   GCSSLQKNYD   PDNFLLNGTD   DNPYRIVKNP   VTIKIFAPHS 60
SGNPNYSDLE   MFKYLSEITG   LNFEFTTPDT   SAYTNQRTGA   WSSDNTIPDL   FLFNNPISEL 120
VEYAEKKYDA   YVPFNDGNYS   YTVNGTQVNV   GNIIDNYMPN   YKKGLDNNFG   VDKEKGDAKE 180
TATLSDGYMY   STLSVKDVAR   DLTFKMFINQ   KWIDNINNEF   GGYKGKKLPN   ANDVTTIEEY 240
LTILRAFKEL   DANLNDDAND   EIPVTSKSLE   YLRNFILASY   GYVSTGAEIE   NDNSKYSYVP 300
YQEAYRKYLQ   IARTMWNEGL   MDVSTFSNKT   DNQMAQNGVK   NHLGSFPAAA   AYLIVGYDLE 360
ENYVTFGPLT   SSYYTGTPLQ   WGFGYFNPDG   ATIPQKSVYV   REVARLLDIM   YSDLGAQLIS 420
YGVENKNWTW   DNAEHTSWTF   NVPSTWTGNQ   EQYRATITPN   VGSASALYWS   SNFVEKMNDK 480
IIDSLNKMSQ   KYLPYLKNPE   PYEIKMNAEE   YSKITTIKAS   LDPQLEFLEA   SYIRGDNKKD 540
PYDDNSYNDF   INTLKGYNVD   ELMKCYNDSL   ARYKGK 576
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A133CZN8-F1-model_v4 24 576 24 502 0.755 0.8565
AF-A0A133D019-F1-model_v4 27 576 34 485 0.6782 0.7995
AF-A0A133CDW9-F1-model_v4 25 568 35 444 0.6283 0.7757
AF-Q7AQ51-F1-model_v4 27 566 32 445 0.6263 0.767
AF-A0A133CSA1-F1-model_v4 31 561 24 427 0.6245 0.7671
AF-O53485-F1-model_v4 27 566 33 439 0.6225 0.7693
AF-A0A132ZDH4-F1-model_v4 33 559 25 427 0.6216 0.7656
AF-A0A0H3GHK7-F1-model_v4 33 572 18 433 0.6213 0.7522
AF-K0F002-F1-model_v4 15 565 34 439 0.6189 0.767
AF-A0A133CPC5-F1-model_v4 31 565 28 423 0.6171 0.7681
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 575 33 506 0.7215 0.831
AF-K8EJG7-F1-model_v4 CBM50 , CE4 26 569 29 417 0.601 0.7552
AF-A0A1Q2TKJ3-F1-model_v4 GH49 1 566 84 797 0.4999 0.5976
A0A9Q8PNJ5 GH4 1 565 263 866 0.4794 0.5915
A0A242CSU4 CBM35 47 576 569 995 0.4396 0.7281
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A0M1Q963 GH43_11 24 575 33 506 0.7215 0.831
K8EJG7 CBM50 , CE4 26 569 29 417 0.601 0.7552
A0A1Q2TKJ3 GH49 1 566 84 797 0.4999 0.5976
A0A9Q8PNJ5 GH4 1 565 263 866 0.4794 0.5915
A0A242CSU4 CBM35 47 576 569 995 0.4396 0.7281
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
3omb-assembly1.cif.gz_A 27 575 1 503 0.7921 0.8575
6fth-assembly1.cif.gz_A 48 576 1 496 0.7905 0.8616
5xs8-assembly1.cif.gz_A 50 570 1 474 0.7647 0.8522
5g5y-assembly1.cif.gz_A 48 576 1 492 0.7559 0.8324
4tqu-assembly1.cif.gz_Q 41 576 1 489 0.754 0.8335
5h6u-assembly1.cif.gz_A 44 576 1 486 0.7505 0.8303
6jhx-assembly2.cif.gz_B 41 576 1 483 0.7497 0.8309
3vlw-assembly2.cif.gz_B 42 576 1 488 0.746 0.8238
5g62-assembly2.cif.gz_B 51 576 1 490 0.7459 0.8221
5suo-assembly1.cif.gz_A 50 576 1 449 0.7055 0.808
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A0H2URD6-F1-model_v4 22 576 25 536 0.7589 0.8381
AF-P37966-F1-model_v4 29 574 28 502 0.7489 0.8559
AF-Q795R2-F1-model_v4 29 575 30 498 0.7367 0.8493
AF-Q8FVS7-F1-model_v4 28 565 19 411 0.6551 0.8085
AF-Q578M8-F1-model_v4 32 565 20 411 0.6532 0.8079
AF-O31518-F1-model_v4 39 565 26 427 0.625 0.7714
AF-O32156-F1-model_v4 21 568 18 422 0.6232 0.7596
AF-O50499-F1-model_v4 1 574 1 469 0.6226 0.7049
AF-Q7LYW7-F1-model_v4 38 568 36 450 0.6181 0.7602
AF-P29822-F1-model_v4 47 565 24 422 0.6137 0.7586
Download Full SwissProt Results