PROTEIN: MGYG000003550_60_88
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Protein File & Metadata
Source:
MGYG000003550_60_88.pdb
Genome ID:
Protein ID:
MGYG000003550_60_88
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Protein Sequence
MKYSILICIF DLLLFQNCIC RIFPNFSMFD EIICIIFTLA MLLTCSLRPN KIKNILKKEK 60 EAILLLAALI IIGLVGNAIC KYQYNITAIL KDIMSLSKFI VVYISSLIIF MNIDKEILLR 120 KIARRSRIFI MVFFFFALVN LICDIGMGYD IRSGIRTYKF IYSHPTYLVI STIVMMCILI 180 AEGRESNKAY IGLALSILLF SGRSKAIMFI LLYLFIELVW KNIEKIKLYQ LAFIIGIAST 240 IFIKKIMDYF SYGYTSARPA LYLIGLEIAR KNLPIGSGFG TFASSISAKY YSKAYIVYKL 300 NTVWGMSKDD YSYIADTFWP YIYGQFGILG FCIFVLIIYN LYNSIRKRYS YSKCRIKAIN 360 LLMVYILISS IAEAIFIDST GTFIFVVFAV FLGSNNLRLK KSYCEET 407
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-O25682-F1-model_v4 | 1 | 404 | 9 | 429 | 0.6726 |
0.7177 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-M1FGR5-F1-model_v4 | GT2 | 1 | 407 | 4 | 514 | 0.5771 |
0.728 |
| AF-A0A212QE91-F1-model_v4 | GT2 | 1 | 407 | 6 | 412 | 0.577 |
0.7259 |
| AF-A0A0K1UBS5-F1-model_v4 | GT2 | 1 | 407 | 6 | 412 | 0.575 |
0.7236 |
| AF-E4PMS8-F1-model_v4 | GT2 | 1 | 407 | 6 | 509 | 0.5749 |
0.7231 |
| AF-A0A1D9GRK7-F1-model_v4 | GT2 | 1 | 407 | 2 | 504 | 0.5723 |
0.7185 |
| AF-A0A3Q9NIF5-F1-model_v4 | GT2 | 1 | 407 | 3 | 512 | 0.5712 |
0.7181 |
| AF-A0A6C0U049-F1-model_v4 | GT2 | 1 | 407 | 10 | 511 | 0.5699 |
0.7172 |
| AF-A0A346S464-F1-model_v4 | GT2 | 1 | 407 | 2 | 513 | 0.5662 |
0.7135 |
| QSP96058.1 | GT2 | 1 | 407 | 10 | 519 | 0.5638 |
0.7118 |
| A0A9Q9IL13 | GT4 | 1 | 405 | 20 | 503 | 0.5571 |
0.7845 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| QSP96058.1 | GT2 | 1 | 407 | 10 | 519 | 0.5638 |
0.7118 |
| A0A9Q9IL13 | GT4 | 1 | 405 | 20 | 503 | 0.5571 |
0.7845 |
| B5YD26 | GT9 | 1 | 407 | 44 | 585 | 0.5441 |
0.7208 |
| A0A517MXC4 | GT26 | 1 | 404 | 19 | 451 | 0.5414 |
0.713 |
| D5MJ04 | GT9 | 1 | 407 | 27 | 565 | 0.5389 |
0.712 |
| WBY01952.1 | GT9 | 1 | 405 | 17 | 558 | 0.5375 |
0.7118 |
| A0A2P1NHY6 | GT4 | 1 | 403 | 28 | 445 | 0.5172 |
0.7063 |
| B8IGI7 | GH16_7 | 1 | 402 | 20 | 459 | 0.5171 |
0.7095 |
| K2DNF3 | GT83 | 1 | 401 | 21 | 448 | 0.5159 |
0.737 |
| UII34295.1 | GT4 | 1 | 406 | 18 | 422 | 0.5087 |
0.6773 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P37784-F1-model_v4 | 1 | 407 | 3 | 380 | 0.6797 |
0.7316 |
| AF-Q00474-F1-model_v4 | 23 | 406 | 4 | 398 | 0.6428 |
0.6942 |
| AF-Q6F7F9-F1-model_v4 | 1 | 398 | 8 | 404 | 0.5824 |
0.6964 |