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PROTEIN: MGYG000002878_38_11

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Protein File & Metadata
Download PDB File
Source:
MGYG000002878_38_11.pdb
Genome ID:
MGYG000002878
Protein ID:
MGYG000002878_38_11

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Detailed structural information will appear here after analysis...

Protein Sequence 
MKMQKHKCFL   LLTLLIIFPA   SCRKDVLCTD   DSSEEEYFEN   NVIFNGNLSL   FSFNRWPEYE 60
IPNNNKRRAI   ISHLLDMQCI   GSREAMWNSY   GSIKPVSFGQ   SYDFSYNDKV   FNELAVAGLR 120
YCLQLKVDAL   VDNPDNYGSE   WEKNAEWYIK   MVASRYGNSP   LYYCPMNEPD   NEGQRVNGVP 180
PLTTDQIMRV   QEVTYRVLKS   VNPDIKVASS   PLCMLQDNDT   YTSSGRQVLL   AGITKYCDYF 240
AFHKHVDIGE   DGRHTEMDLW   KYMDEAECAG   YPRKPALVHE   NGTRMTLRYV   YPEATEDDMH 300
RFKAYWAGND   LIQMKALGLK   YIVVYSLAGS   LSSGGEYNLV   DLNTPVGSGF   KVHEPEYSVY 360
RDLWHPRAHA   LSKGINGGFE   SPNPDKSRGW   VVTFRGRSFE   GIGRVEPKEW   DYVSIVSDGA 420
FSGVHCLKMS   AIDFKGTGIY   DKGGITANRC   RRLVEGLVPG   RQYKVSVWVR   LEKTAGQEAP 480
KAYLRAMGYS   LYGRTAEKEL   LYGYSEGRYA   YMEVSFTAEN   PWVVISLEHN   GKGVAFWDDV 540
TLE 543
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9I1N2-F1-model_v4 37 543 42 442 0.5782 0.7091
AF-A0A175VST8-F1-model_v4 34 543 23 365 0.5625 0.7216
AF-K0EUZ8-F1-model_v4 37 529 40 443 0.5516 0.6715
AF-A0A175W202-F1-model_v4 24 521 16 380 0.5299 0.6973
AF-A0A0D2H7L2-F1-model_v4 34 407 78 426 0.5208 0.7091
AF-Q67XN2-F1-model_v4 37 388 29 489 0.5184 0.7528
AF-Q8RXN9-F1-model_v4 37 405 30 493 0.5171 0.7223
AF-Q60DY1-F1-model_v4 37 415 34 509 0.5168 0.7141
AF-Q0DIT2-F1-model_v4 37 446 50 528 0.5155 0.672
AF-A0A1C1CFT0-F1-model_v4 34 407 96 430 0.5138 0.7275
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-K9U6X5-F1-model_v4 GH39 17 543 23 483 0.8034 0.9016
AF-K9TTD4-F1-model_v4 GH39 19 543 23 487 0.789 0.8812
AF-A0A7I7WX59-F1-model_v4 GH39 43 369 1 306 0.6285 0.8129
K9U0S9 GH39 36 388 52 351 0.6237 0.8865
QQM79835.1 GH39 37 452 26 340 0.6195 0.8263
AF-A0A193SER8-F1-model_v4 GH39 1 456 1 333 0.6172 0.7739
AF-A0A0D5A5Q1-F1-model_v4 GH39 23 456 9 356 0.617 0.7716
AF-A0A193SEP9-F1-model_v4 GH39 7 522 4 337 0.6169 0.7762
AF-A0A346NT66-F1-model_v4 GH39 3 525 3 363 0.6137 0.7554
A0A656VHY7 GH39 38 513 22 395 0.6133 0.7584
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1Q4HCP1 GH39 23 455 15 357 0.6341 0.803
K9U0S9 GH39 36 388 52 351 0.6237 0.8865
QQM79835.1 GH39 37 452 26 340 0.6195 0.8263
A0A2Z5QL98 GH39 37 456 21 343 0.619 0.8102
A0A1C3SZV1 GH39 35 525 26 342 0.6144 0.8174
A0A346NT66 GH39 3 525 3 363 0.6137 0.7554
UHM91440.1 GH39 36 456 24 340 0.6134 0.8135
QLJ65213.1 GH39 38 457 23 339 0.6134 0.8122
A0A656VHY7 GH39 38 513 22 395 0.6133 0.7584
A0A193SEG1 GH39 37 455 23 337 0.6132 0.8139
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4zn2-assembly3.cif.gz_C 37 541 13 413 0.6012 0.7132
3nj3-assembly2.cif.gz_B 34 455 9 326 0.5881 0.7615
1xyz-assembly2.cif.gz_B 34 455 5 320 0.5836 0.7525
1ur1-assembly1.cif.gz_A 35 543 4 346 0.566 0.7064
4k68-assembly2.cif.gz_B 35 453 4 345 0.5658 0.7068
2cnc-assembly1.cif.gz_A 35 542 5 350 0.5623 0.7007
3ays-assembly1.cif.gz_A 38 370 11 351 0.5569 0.7242
3ayr-assembly1.cif.gz_A 38 387 19 359 0.5499 0.709
5z3k-assembly1.cif.gz_A 37 450 16 408 0.5485 0.7074
6ziv-assembly8.cif.gz_HHH 37 391 3 401 0.5458 0.7112
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P29417-F1-model_v4 34 513 37 349 0.5595 0.764
AF-P49942-F1-model_v4 35 455 32 376 0.5462 0.7067
AF-Q8J1Y4-F1-model_v4 31 461 29 367 0.5366 0.732
AF-G4MLU0-F1-model_v4 31 461 29 367 0.5359 0.7313
AF-P23552-F1-model_v4 35 424 19 409 0.5314 0.6997
AF-B4XVN1-F1-model_v4 29 542 31 464 0.5297 0.6185
AF-P40942-F1-model_v4 35 406 49 387 0.5292 0.7054
AF-P23661-F1-model_v4 38 461 76 409 0.5276 0.7331
AF-Q9ZFM2-F1-model_v4 37 452 15 478 0.5271 0.6633
AF-Q59437-F1-model_v4 37 406 16 479 0.5243 0.7167
Download Full SwissProt Results