PROTEIN: MGYG000001239_94_4
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Protein File & Metadata
Source:
MGYG000001239_94_4.pdb
Genome ID:
Protein ID:
MGYG000001239_94_4
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Protein Sequence
MRDEKIDLGI CDLNYKYTNK EDCWSTVGEK TINLKNVSEE IFLELNEKYL LYGPYNKIFK 60 SSIIKKQKIK FIKEMSYGED LIFNLSYLQY VKIIKTTNQT RYNYIADIDN SLANKYRADR 120 FKTGKIIFEE LYKFFEINGM LSEKSKKYLY GRIFDDAYNN ICECVKNQSC KESLKEIKKI 180 LFDQKIKESY AYIDNRKYSA NLIKLMHHKK IVIIYIYIKM ALKNIN 226
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A133CIJ8-F1-model_v4 | 1 | 226 | 108 | 335 | 0.6677 |
0.8222 |
| AF-A0A0H3GYS5-F1-model_v4 | 1 | 214 | 107 | 328 | 0.6033 |
0.7694 |
| AF-Q8DPD9-F1-model_v4 | 1 | 225 | 105 | 322 | 0.6021 |
0.7535 |
| AF-A0A286V0T0-F1-model_v4 | 1 | 225 | 107 | 339 | 0.5943 |
0.7454 |
| AF-Q329N9-F1-model_v4 | 1 | 213 | 110 | 330 | 0.5937 |
0.7644 |
| AF-Q8ZL53-F1-model_v4 | 1 | 213 | 110 | 330 | 0.5888 |
0.7661 |
| AF-P11290-F1-model_v4 | 1 | 213 | 110 | 330 | 0.5885 |
0.7658 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A3A9VC37-F1-model_v4 | GT2 | 1 | 223 | 108 | 335 | 0.7544 |
0.9238 |
| QKE74324.1 | GT2 | 1 | 226 | 97 | 325 | 0.7492 |
0.8986 |
| AF-A0A5J6XV29-F1-model_v4 | GT2 | 1 | 226 | 101 | 336 | 0.7486 |
0.9208 |
| UUF11106.1 | GT2 | 1 | 226 | 107 | 341 | 0.7476 |
0.9124 |
| AF-A0A1J0GHD2-F1-model_v4 | GT2 | 1 | 226 | 109 | 344 | 0.7472 |
0.9247 |
| AF-A0A7R7ICJ1-F1-model_v4 | GT2 | 1 | 226 | 106 | 335 | 0.7445 |
0.909 |
| AF-U3U4C9-F1-model_v4 | GT2 | 9 | 225 | 1 | 211 | 0.7436 |
0.8041 |
| AF-A0A1Q2KXB3-F1-model_v4 | GT2 | 1 | 226 | 1 | 341 | 0.7434 |
0.9161 |
| A0A076IM37 | GT2 | 1 | 224 | 101 | 326 | 0.7433 |
0.8996 |
| WAG47631.1 | GT2 | 1 | 226 | 102 | 329 | 0.7413 |
0.8938 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3A9VC37 | GT2 | 1 | 223 | 108 | 335 | 0.7544 |
0.9238 |
| QKE74324.1 | GT2 | 1 | 226 | 97 | 325 | 0.7492 |
0.8986 |
| UUF11106.1 | GT2 | 1 | 226 | 107 | 341 | 0.7476 |
0.9124 |
| A0A1J0GHD2 | GT2 | 1 | 226 | 109 | 344 | 0.7472 |
0.9247 |
| A0A7R7ICJ1 | GT2 | 1 | 226 | 106 | 335 | 0.7445 |
0.909 |
| A0A1Q2KXB3 | GT2 | 1 | 226 | 1 | 341 | 0.7434 |
0.9161 |
| A0A076IM37 | GT2 | 1 | 224 | 101 | 326 | 0.7433 |
0.8996 |
| WAG47631.1 | GT2 | 1 | 226 | 102 | 329 | 0.7413 |
0.8938 |
| A0A2N8HIG6 | GT2 | 1 | 226 | 104 | 335 | 0.7352 |
0.8994 |
| F3ADU1 | GT2 | 1 | 226 | 101 | 326 | 0.7316 |
0.8787 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P71059-F1-model_v4 | 1 | 226 | 107 | 340 | 0.6547 |
0.8087 |
| AF-P71057-F1-model_v4 | 1 | 225 | 105 | 335 | 0.6122 |
0.7597 |
| AF-P11290-F1-model_v4 | 1 | 213 | 110 | 330 | 0.5885 |
0.7658 |