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PROTEIN: HRGMv2_4820_14_34

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4820_14_34.pdb
Genome ID:
HRGMv2_4820
Protein ID:
HRGMv2_4820_14_34

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSSAQAPHRR   REHAAGLIDS   MLLIVTRIGA   NLLTLCWTLL   LVRLLQPEAS   GMALQAISVA 60
QILSILVTLN   VESGSVRVIV   PAREHGRMQE   AAGFIRFNRR   MMLVTLPILA   ALAGLGLLAG 120
LQPAQPPAAL   AAMALAVVLV   AMARLSARHA   TALGVMRKGL   LPRLLTGPIV   LTLGLGLAAW 180
AGVPMQPWHV   LLLYALSEGL   TVVIQNSLLR   KDFAFLHSVA   APMGAWRDWT   RMGLWLSPGL 240
VMTEYRKAIL   IAAAGLTLTG   TQTSLFAVAF   SIINFINFGV   AAVDVAFSPR   IAQAMAAGQD 300
LRRDRLLATS   SAIKLAGWLL   GVGLVLGFGH   LALGWFGPQF   QAAQPALLIL   LLVPAIQILF 360
GPASVLLSSR   GQGRADFTGN   LIGALACIAA   VAGLGAVSGV   TGAAFGAVLG   QLVQQSVMMR 420
QCRRKLNIDP   SLASLRHLLR   GRDHAAPVTP 450
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37746-F1-model_v4 9 437 1 415 0.8377 0.8895
AF-Q32EG2-F1-model_v4 16 427 1 396 0.8142 0.883
AF-P26400-F1-model_v4 10 428 6 429 0.8019 0.8595
AF-Q58467-F1-model_v4 8 445 1 499 0.796 0.8792
AF-Q2G262-F1-model_v4 8 442 1 465 0.7914 0.8553
AF-P0AAA7-F1-model_v4 12 429 1 416 0.7808 0.833
AF-P9WLW1-F1-model_v4 4 427 19 432 0.7807 0.8489
AF-P9WKX9-F1-model_v4 7 427 21 431 0.7806 0.8535
AF-K0EMV9-F1-model_v4 3 429 8 420 0.78 0.8498
AF-Q5FAD8-F1-model_v4 13 442 1 458 0.7776 0.8484
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T089-F1-model_v4 GT4 8 442 1 496 0.7498 0.8415
B1FZW0 GT2 7 429 1 427 0.6538 0.8576
AF-A0A248VQW5-F1-model_v4 GT2 10 429 1 427 0.6534 0.8628
QJC17489.1 GT2 1 442 90 830 0.6469 0.865
AF-A0A1P8M2V1-F1-model_v4 GT2 10 429 221 685 0.6455 0.8472
AF-A0A345VG16-F1-model_v4 GT2 11 429 269 679 0.6448 0.859
AF-A0A5B8KBR4-F1-model_v4 GT2 10 429 216 680 0.6435 0.8424
A0A0J6W0G8 GH16_3 8 439 15 448 0.6419 0.8205
AF-A0A517ZC93-F1-model_v4 GT4 8 450 16 528 0.6411 0.8946
AF-F9ZKY1-F1-model_v4 GT2 2 450 16 522 0.625 0.8249
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T089 GT4 8 442 1 496 0.7498 0.8415
B1FZW0 GT2 7 429 1 427 0.6538 0.8576
QJC17489.1 GT2 1 442 90 830 0.6469 0.865
A0A0J6W0G8 GH16_3 8 439 15 448 0.6419 0.8205
A0A517ZC93 GT4 8 450 16 528 0.6411 0.8946
D7BDH0 GT4 10 450 1 584 0.6334 0.8644
F9ZKY1 GT2 2 450 16 522 0.625 0.8249
A0A3Q9G719 GT4 11 450 1 899 0.6167 0.8453
A0A6G6WD04 GH39 14 439 17 431 0.6161 0.8701
A0A1V0ABA3 GT4 2 428 212 785 0.6121 0.8262
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
6fhz-assembly1.cif.gz_A 17 429 8 435 0.7621 0.8379
6nc6-assembly2.cif.gz_B 18 447 1 461 0.7363 0.7969
3wbn-assembly1.cif.gz_A 8 428 5 443 0.6714 0.7407
3vvn-assembly1.cif.gz_A 5 428 1 441 0.6608 0.7242
3vvo-assembly1.cif.gz_A 5 428 1 441 0.6319 0.6958
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P37746-F1-model_v4 9 437 1 415 0.8377 0.8895
AF-P37781-F1-model_v4 14 429 1 416 0.8162 0.8672
AF-Q03583-F1-model_v4 16 427 1 396 0.8102 0.879
AF-Q05347-F1-model_v4 10 428 1 428 0.8101 0.8733
AF-Q99191-F1-model_v4 10 428 7 430 0.8095 0.8688
AF-Q45411-F1-model_v4 7 429 7 428 0.808 0.8648
AF-P26400-F1-model_v4 10 428 6 429 0.8019 0.8595
AF-Q58467-F1-model_v4 8 445 1 499 0.796 0.8792
AF-D4GU68-F1-model_v4 12 442 1 457 0.7872 0.8544
AF-P39855-F1-model_v4 16 427 1 396 0.7848 0.8547
Download Full SwissProt Results