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PROTEIN: HRGMv2_4819_187_3

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4819_187_3.pdb
Genome ID:
HRGMv2_4819
Protein ID:
HRGMv2_4819_187_3

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Detailed structural information will appear here after analysis...

Protein Sequence 
MSAAYSLYNL   LPTPARSAAA   SLRGHYLNRW   RYGPETDALV   RSALDREYWS   DFDWENWRAD 60
RLAYLLERAA   TRVPFYRRAW   AERRKLGDDS   SWKILENWEI   LEKESVRADP   LAFVADDRSP 120
NRMFHDHTSG   TTGTSLSLYM   TKETVRKWYA   LFEARSRRWY   GLTRHDRWAI   LGGQLVTPAR 180
QERPPFWVWN   SGLRQLYMSS   YHLSSQNVPA   YIEALEKSDV   RYILGYPSAV   YNIAAEALRL 240
GRKVAGIDIV   ILNAEPVYEY   QREAIELAFN   CPVRATYGMA   EIVAAAGECE   YGKLHQWPEA 300
GIIESGADVG   EGLADFVCTG   LMNADMPLIR   YRVGDSGELS   SAQCVCGRTL   PVIERISGRT 360
DDILYAANGR   QVGRMDPVFK   GGLPIKEAQI   IQDSLSNISV   NYVPADGFRI   AALGELATRI 420
QDRLGLVEVE   FNRMSSIPRT   SRGKFRSVIC   NVDTTTMGSR   DRRGK 465
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P76085-F1-model_v4 37 456 2 437 0.6582 0.7199
AF-A0A0H3GS56-F1-model_v4 40 458 5 438 0.6576 0.7215
AF-K0EXU2-F1-model_v4 35 444 16 368 0.6382 0.7607
AF-Q8DPX2-F1-model_v4 2 461 32 423 0.472 0.5491
AF-P0A399-F1-model_v4 4 453 61 516 0.4669 0.5201
AF-Q9D2R0-F1-model_v4 38 454 28 672 0.452 0.5937
AF-A0A175WGR3-F1-model_v4 44 456 31 657 0.4451 0.5854
AF-Q557X0-F1-model_v4 39 449 3 643 0.4446 0.5851
AF-Q54YU1-F1-model_v4 40 458 32 718 0.4412 0.5913
AF-Q557A8-F1-model_v4 39 453 3 641 0.4382 0.5697
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A4P2R335-F1-model_v4 GT2 24 465 287 748 0.664 0.8647
AF-A0A2L0F8F1-F1-model_v4 GT2 24 462 305 755 0.6381 0.8433
A0A915XJC2 GT2 24 433 10 607 0.5522 0.7752
AF-A0A6G7YF71-F1-model_v4 GT2 25 443 284 727 0.5509 0.7462
AF-S4Y6L4-F1-model_v4 GT2 24 444 286 731 0.5442 0.7406
AF-A0A387B7M2-F1-model_v4 GT2 24 443 286 730 0.5429 0.7372
AF-A9FBI0-F1-model_v4 GT2 24 444 287 731 0.5409 0.7358
AF-A0A4P2QA51-F1-model_v4 GT2 24 444 286 730 0.5367 0.7396
AF-A0A0K1EPJ6-F1-model_v4 GT2 25 445 345 795 0.5309 0.7404
AF-A0A4P7XK67-F1-model_v4 GT4 25 449 386 820 0.5225 0.7295
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A915XJC2 GT2 24 433 10 607 0.5522 0.7752
A0A387B7M2 GT2 24 443 286 730 0.5429 0.7372
A0A0K1EPJ6 GT2 25 445 345 795 0.5309 0.7404
A0A4P7XK67 GT4 25 449 386 820 0.5225 0.7295
USX17773.1 GT4 25 444 398 835 0.52 0.7388
A0A1Y0I9L4 GT4 25 459 413 802 0.5099 0.7802
AZD55811.1 GT2 46 444 349 672 0.4773 0.7946
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
4r1m-assembly2.cif.gz_C 40 454 5 431 0.6625 0.7274
4r1l-assembly1.cif.gz_A 40 453 5 432 0.6612 0.7285
4r1m-assembly1.cif.gz_A 40 453 5 434 0.6609 0.7303
2y4o-assembly1.cif.gz_B 37 451 1 432 0.6573 0.7225
6he0-assembly1.cif.gz_A-2 33 452 11 465 0.6312 0.719
4rvn-assembly1.cif.gz_B 40 460 3 410 0.6132 0.6763
4rvo-assembly1.cif.gz_B 40 460 2 414 0.6111 0.6692
4r1l-assembly3.cif.gz_B 40 460 2 408 0.6104 0.6726
2y27-assembly1.cif.gz_A 41 460 1 409 0.6093 0.6715
4r1m-assembly1.cif.gz_B 40 460 3 412 0.6083 0.6693
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P39860-F1-model_v4 3 443 1 449 0.7168 0.7529
AF-P76085-F1-model_v4 37 456 2 437 0.6582 0.7199
AF-Q9L9C1-F1-model_v4 41 452 9 438 0.649 0.7235
AF-Q72K16-F1-model_v4 40 460 2 429 0.6047 0.6623
AF-O33469-F1-model_v4 40 460 9 422 0.6 0.6637
AF-E2JA32-F1-model_v4 42 457 1 384 0.5745 0.6507
AF-P18204-F1-model_v4 51 451 6 393 0.5249 0.5895
AF-Q632I5-F1-model_v4 2 453 56 482 0.4746 0.5369
AF-P0A399-F1-model_v4 4 453 61 516 0.4669 0.5201
AF-Q9A2I0-F1-model_v4 41 454 19 647 0.4543 0.593
Download Full SwissProt Results