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PROTEIN: HRGMv2_4807_39_4

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4807_39_4.pdb
Genome ID:
HRGMv2_4807
Protein ID:
HRGMv2_4807_39_4

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Detailed structural information will appear here after analysis...

Protein Sequence 
MYFSYKNLKL   SNNRDDVILA   ICKGRRVLHI   GAADSPYTRD   KYASGLLLHK   RLSNVAFELV 60
GIDLDKDAVD   WMNSQGLPET   RVVDMNDVCD   LGFSPEVIIF   GETIEHVVNV   GASLNTLKSC 120
MTQDTRLVIS   TPNCYHLWFA   SMVLRDHELI   HDDHKVGFTY   GLLWQALKSQ   GLKIDDFYFT 180
FLPRERYAWW   MRAWRIASKF   RHGLSETLLA   VCTLDQGEDP   QPAQRM 226
Protein Structure Viewer

Confidence Score (pLDDT)

Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-X8FD48-F1-model_v4 15 218 1 199 0.7386 0.8102
AF-Q9I6A6-F1-model_v4 12 218 2 200 0.7203 0.8014
AF-Q58523-F1-model_v4 12 216 23 205 0.6736 0.8089
AF-K0F098-F1-model_v4 12 216 6 183 0.6703 0.7836
AF-Q32E41-F1-model_v4 11 219 27 260 0.6629 0.7851
AF-P36566-F1-model_v4 11 218 27 258 0.661 0.786
AF-Q58648-F1-model_v4 11 218 41 251 0.6585 0.7699
AF-P96246-F1-model_v4 12 216 22 189 0.6585 0.8249
AF-Q9HV18-F1-model_v4 11 215 25 249 0.6552 0.7753
AF-K0ENI0-F1-model_v4 12 215 37 214 0.655 0.8217
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A2Z5E7Y3-F1-model_v4 GT32 1 217 241 431 0.5611 0.8716
AF-A0A2K8MF23-F1-model_v4 GT32 1 218 235 426 0.561 0.8652
AF-A0A5S9IGK0-F1-model_v4 GT4 1 214 496 711 0.5601 0.9037
AF-D0MDW5-F1-model_v4 GT4 1 214 496 711 0.5595 0.9029
D0MDW5 GT4 1 214 496 711 0.5595 0.9029
AF-A0A5Q2RN83-F1-model_v4 GT2 11 218 261 481 0.5539 0.8249
AF-A0A2I6QIG6-F1-model_v4 GT2 11 216 265 479 0.5539 0.8294
AF-L7VX01-F1-model_v4 GT2 11 215 262 475 0.5507 0.8263
AF-A0A6C7E8P3-F1-model_v4 GT2 11 218 261 475 0.5503 0.819
AF-A0A6F8XU92-F1-model_v4 GT2 11 218 268 481 0.5499 0.8205
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T3B3 GT2 11 216 55 268 0.6325 0.7674
A0A9E8FQJ2 GT32 1 218 231 422 0.566 0.87
D0MDW5 GT4 1 214 496 711 0.5595 0.9029
A0A514WK95 GT32 1 218 250 442 0.5582 0.868
A0A2I6QIG6 GT2 11 216 265 479 0.5539 0.8294
A0A9X3VSN9 GT32 1 216 281 470 0.5453 0.8761
G2SZM9 GT2 14 218 237 447 0.5413 0.7965
UKL14396.1 GT2 11 226 5 301 0.5382 0.7943
A0A926KJK6 GT2 11 216 318 534 0.5376 0.8324
A0A0P0WBQ3 GH36 11 216 71 265 0.537 0.6832
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2p7h-assembly1.cif.gz_A 12 217 10 228 0.7351 0.8281
3cc8-assembly1.cif.gz_A-2 14 217 3 211 0.7002 0.7703
3l8d-assembly1.cif.gz_A-2 11 216 9 202 0.6859 0.7748
4htf-assembly1.cif.gz_A 11 216 20 244 0.6818 0.7941
1vlm-assembly1.cif.gz_A 12 216 25 207 0.6764 0.8152
1vlm-assembly2.cif.gz_B 12 216 24 207 0.6756 0.8108
2gs9-assembly1.cif.gz_B 12 213 24 211 0.6724 0.7976
5cm2-assembly1.cif.gz_Z 11 217 5 183 0.6711 0.7798
6f5z-assembly1.cif.gz_A 12 216 24 226 0.6688 0.7638
4htf-assembly1.cif.gz_B 11 216 27 247 0.6676 0.7821
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q58523-F1-model_v4 12 216 23 205 0.6736 0.8089
AF-P36566-F1-model_v4 11 218 27 258 0.661 0.786
AF-Q58648-F1-model_v4 11 218 41 251 0.6585 0.7699
AF-Q8XDG3-F1-model_v4 11 219 27 260 0.6567 0.7782
AF-A0QUV5-F1-model_v4 12 215 34 257 0.6535 0.7827
AF-Q9JWE6-F1-model_v4 12 216 38 238 0.644 0.7603
AF-A9KGL7-F1-model_v4 12 216 38 234 0.6437 0.7682
AF-Q7VKW2-F1-model_v4 12 215 34 236 0.6432 0.7492
AF-O05400-F1-model_v4 12 214 24 180 0.6424 0.8312
AF-B6J5Y2-F1-model_v4 12 216 38 234 0.6424 0.7665
Download Full SwissProt Results