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PROTEIN: HRGMv2_4805_169_2

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_4805_169_2.pdb
Genome ID:
HRGMv2_4805
Protein ID:
HRGMv2_4805_169_2

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Detailed structural information will appear here after analysis...

Protein Sequence 
MGAMGILRGV   LLSAGLFLCA   ALYGDVPETL   FNGLWEVCNF   GNGEGVVDFW   DSSSGESTAV 60
LFTPSDQSWL   FLVRNCWKEE   LADAETLYFS   VEVMTNRPAK   IKTVISENAV   WGGLTFKVSY 120
GGMSKPYRWE   RVITSMKRSD   MSGYLSFGVG   MEYTNAGVWL   AVRNPEITTE   PPPAEVLSSD 180
ELLIPESYEE   HDIISTVRTI   NSIKRVSAAD   PEKFAAEGVA   ADIAELTRLI   AEPSLEKDTR 240
GRECHTSEFF   RKGSDIASRY   NEPALTIAAM   PQDTEYHRGT   AVTDDFDGTS   LTLPVNGEDG 300
ILYLLRNNSA   ATETLHITVT   GDMAQYAKAY   QLLEIDGYPD   YPVELKEDNF   VRIGPDETIG 360
VLVYLKTAGA   TPGVLKGSVE   FKPYNYNIPT   RSEELNLTVS   ELVLPETVYP   LKTFHWDYND 420
AKDLAKTRFM   VDNRINTFHI   TNLPRPIPGL   SSTAPEFIEL   TDEIEGSPEA   SFKSLIDSIA 480
NIRAASAGKP   FYLLIEVWYA   RDHGGWHEEY   NPWLDRLVQV   LENEGLSYDD   WYLEIYDETL 540
CPEFLESCKK   IHEHNPNIQI   FSDYLPKDNQ   ELIDAYLPHL   AVWCPQGWQF   GENHDEEIEY 600
VRANRKSEMW   FYDCNPSPAT   PPRYFRCQPL   ISAAWDLDGS   CYWTSCYSTE   PDKTWKYTFS 660
FFYKTADGLV   PSRRWLLWQT   GLSDYLMFKE   ALKREDLREP   AQKFLEDFKE   KPINNLLGGK 720
VLEWRNANLK 730
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q7XI89-F1-model_v4 31 730 11 654 0.5883 0.6405
AF-I1K7S9-F1-model_v4 36 730 7 645 0.5795 0.6313
AF-Q7Y231-F1-model_v4 27 730 6 638 0.5747 0.6286
AF-A0A1D6EZK5-F1-model_v4 12 730 10 659 0.568 0.6154
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A8D9L875 GH123 29 730 7 603 0.6354 0.7124
AF-A0A5B7UJB5-F1-model_v4 GH123 67 730 2 549 0.6325 0.7306
AF-A0A1X7HAS3-F1-model_v4 GH123 125 730 6 589 0.6321 0.7167
AF-A0A221M997-F1-model_v4 GH0 256 730 1 542 0.6305 0.8311
AF-A0A6G7C4V1-F1-model_v4 GH123 67 730 1 553 0.6299 0.7258
AF-A0A7G5EAZ2-F1-model_v4 GH123 67 730 1 553 0.6288 0.7242
AF-A0A220U2D6-F1-model_v4 GH0 261 730 1 537 0.6285 0.8336
AF-A0A1G4GAW2-F1-model_v4 GH123 66 730 3 557 0.628 0.722
AF-A0A088F0L5-F1-model_v4 GH123 66 730 3 553 0.6266 0.7253
AF-A0A1Z2XMM6-F1-model_v4 GH0 262 730 1 533 0.6261 0.8244
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A8D9L875 GH123 29 730 7 603 0.6354 0.7124
UFH47381.1 GH123 64 730 28 579 0.6215 0.7328
A0A1C4X9B7 GH123 21 730 6 585 0.6172 0.7032
A0A4Y1VKW6 GH123 18 730 3 577 0.6171 0.6986
H3NMZ8 GH123 262 729 1 536 0.6169 0.8148
UJH90177.1 GH123 261 730 24 559 0.6168 0.8301
QYX26352.1 GH123 262 730 1 555 0.6154 0.8342
A0A1B1SB07 GH123 262 730 20 541 0.6139 0.8135
UOY04880.1 GH123 152 730 36 587 0.6137 0.7303
A0A5B8WCF2 GH123 152 730 30 581 0.6121 0.7223
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5fqh-assembly1.cif.gz_A 262 730 1 573 0.6267 0.8618
5fqe-assembly2.cif.gz_B 262 730 1 573 0.6265 0.8599
5fr0-assembly1.cif.gz_A 263 730 1 569 0.6248 0.8572
5l7u-assembly1.cif.gz_B 67 728 11 561 0.6205 0.7207
5l7v-assembly1.cif.gz_B 67 728 10 562 0.6195 0.7178
Download Full PDB Results
Structural Homologs - SwissProt