PROTEIN: HRGMv2_4798_38_7
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Protein File & Metadata
Source:
HRGMv2_4798_38_7.pdb
Genome ID:
Protein ID:
HRGMv2_4798_38_7
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Protein Sequence
MDISDFINHL ASFQGIHVFN PWKDWAIDYD VPGAVGIRRR NLRDYLSLRL GKAKILLIAE 60 ACGYQGGQFS GIAMTCERML LDFHPAVNSE MIVRRKGERT SRKDSPFITK PAQIEKGFNE 120 PTDSVVWKAC LDAGLAPEEF ILWNIFPFHP YKKGNLLSNR TPSEEELEIG LSYTKELLEI 180 TGSLPLFAIG KKSETTLTEA GFTVTGFRHP ANGGANIFRM QLKEALKK 228
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53HV7-F1-model_v4 | 1 | 228 | 22 | 266 | 0.6703 |
0.7494 |
| AF-Q811Q1-F1-model_v4 | 1 | 228 | 29 | 266 | 0.6619 |
0.7489 |
| AF-Q9VEM1-F1-model_v4 | 1 | 228 | 38 | 274 | 0.6618 |
0.7503 |
| AF-Q6P5C5-F1-model_v4 | 1 | 228 | 31 | 268 | 0.6603 |
0.7482 |
| AF-A0A2R8PW02-F1-model_v4 | 1 | 228 | 33 | 277 | 0.6601 |
0.7499 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 5h93-assembly3.cif.gz_C | 2 | 228 | 1 | 230 | 0.7084 |
0.7425 |
| 5h93-assembly2.cif.gz_B | 1 | 228 | 1 | 232 | 0.7083 |
0.7423 |
| 5h93-assembly4.cif.gz_D | 1 | 228 | 1 | 236 | 0.7053 |
0.7462 |
| 5h93-assembly1.cif.gz_A | 2 | 228 | 1 | 233 | 0.7053 |
0.7437 |
| 5h99-assembly2.cif.gz_B | 1 | 228 | 1 | 229 | 0.7052 |
0.7361 |
| 5h99-assembly1.cif.gz_A | 1 | 228 | 1 | 228 | 0.7039 |
0.7338 |
| 1oe6-assembly1.cif.gz_A | 1 | 228 | 4 | 241 | 0.7002 |
0.7498 |
| 5h98-assembly1.cif.gz_A | 2 | 228 | 1 | 212 | 0.6889 |
0.7452 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q53HV7-F1-model_v4 | 1 | 228 | 22 | 266 | 0.6703 |
0.7494 |
| AF-Q59I47-F1-model_v4 | 1 | 228 | 27 | 268 | 0.6689 |
0.7488 |
| AF-Q811Q1-F1-model_v4 | 1 | 228 | 29 | 266 | 0.6619 |
0.7489 |
| AF-Q9YGN6-F1-model_v4 | 1 | 228 | 40 | 277 | 0.6617 |
0.7507 |
| AF-Q6P5C5-F1-model_v4 | 1 | 228 | 31 | 268 | 0.6603 |
0.7482 |