PROTEIN: HRGMv2_4752_6_78
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Protein File & Metadata
Source:
HRGMv2_4752_6_78.pdb
Genome ID:
Protein ID:
HRGMv2_4752_6_78
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Protein Sequence
MEDKKNKIIK IVRNSGIILL LVITSIITIT NILYFFKIEI TKWHLPFIYL LTNIIFILIY 60 KKKNKIINLL ISSMIAILVF AGAITFSGNL YDLSVDGNFY HKLAIGSLKN GWNPVYENNE 120 DFNKEQGNAI DIEQGSGVLW TDHYTKGNWT FSAVIYSFTE NIESGKCITI LLMYICFTLI 180 MSYLSKKINL IFSIIIGLLL VINPITIVQA TNYYIDGDLG LSLFIILYAL IAITDKNCID 240 SKFEKFMILA CSLIICINVK FTGLAFAGIF CLLFYIYWLY NSKKDSKEQF IKNIKFYTIF 300 YIITVLISVC IVGYSSYVRN TIEHKNPLYP LFGKDKADII TTMQPNYFSQ RNVIQKFMIS 360 IFSKGENVTY SYERDDIKPT IKVPFTFTKQ ELSNYNIPDI RISGFGPWFS GILIISVIIT 420 IYAYYDMIKN KRKNIIVPYS LILLGIVILL FIIDGNWWAR YTPYLYLVPI FSLIYLVKDK 480 NDKIKFLIGC ILGITMIINS LMILSVNIKN YENNGAYVEN KLNMFEKYSI DKDVVKIKLT 540 DYIYQGALYN LCDKNINFEL DDKIEGKNEG YFFTY 575
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CD98-F1-model_v4 | 7 | 575 | 23 | 642 | 0.5971 |
0.6568 |
| AF-P72045-F1-model_v4 | 7 | 575 | 23 | 654 | 0.594 |
0.6585 |
| AF-Q9CDA6-F1-model_v4 | 7 | 568 | 2 | 621 | 0.5397 |
0.5913 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A7M2ZZ44 | GT83 | 80 | 575 | 18 | 470 | 0.6397 |
0.7478 |
| AF-A0A2R3J1F3-F1-model_v4 | GT83 | 80 | 575 | 18 | 470 | 0.6378 |
0.7458 |
| AF-A6VCS3-F1-model_v4 | GT83 | 80 | 575 | 18 | 470 | 0.6367 |
0.7446 |
| AF-A0A6N0KH02-F1-model_v4 | GT83 | 80 | 575 | 18 | 470 | 0.6366 |
0.7446 |
| UDQ98670.1 | GT83 | 1 | 575 | 9 | 500 | 0.6327 |
0.7088 |
| AF-A0A068N115-F1-model_v4 | GT83 | 9 | 575 | 10 | 486 | 0.6312 |
0.7139 |
| AF-A0A5K8AGD7-F1-model_v4 | GT83 | 80 | 575 | 21 | 486 | 0.6304 |
0.7403 |
| AF-A0A5P8JK16-F1-model_v4 | GT83 | 12 | 575 | 12 | 473 | 0.6303 |
0.7272 |
| AF-A0A7D4IAN2-F1-model_v4 | GT83 | 5 | 575 | 4 | 470 | 0.63 |
0.718 |
| AF-A0A6P1VIK5-F1-model_v4 | GT83 | 79 | 575 | 21 | 486 | 0.6297 |
0.7269 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| D1CEC5 | GT39 | 2 | 513 | 13 | 426 | 0.6399 |
0.7802 |
| A0A7M2ZZ44 | GT83 | 80 | 575 | 18 | 470 | 0.6397 |
0.7478 |
| C1D745 | GT83 | 82 | 575 | 21 | 472 | 0.6347 |
0.7462 |
| UDQ98670.1 | GT83 | 1 | 575 | 9 | 500 | 0.6327 |
0.7088 |
| A0A418T1M6 | GT83 | 80 | 575 | 19 | 473 | 0.6294 |
0.7356 |
| A0A6C2YNQ2 | GT83 | 1 | 575 | 17 | 498 | 0.6292 |
0.7158 |
| P73712 | GT83 | 79 | 575 | 21 | 486 | 0.6275 |
0.7245 |
| UYM16136.1 | GT83 | 82 | 575 | 15 | 495 | 0.6245 |
0.7131 |
| UVH60577.1 | GT83 | 3 | 575 | 1 | 484 | 0.6234 |
0.7107 |
| A0A0F7XTI1 | GT83 | 1 | 575 | 1 | 463 | 0.6233 |
0.7124 |
Structural Homologs - PDB
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q9CDA6-F1-model_v4 | 7 | 568 | 2 | 621 | 0.5397 |
0.5913 |